Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3692 280 3e-73 seq1416 104 4e-20 seq1966 82.4 1e-13 >seq3692 Length=1996 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 617 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 676 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 677 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 736 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 737 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 796 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 797 GTAATTATTCTGACACCTCT 816 >seq1416 Length=5448 Score = 104 bits (114), Expect = 4e-20 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||||| ||| ||||||||||||||||| | ||||| | ||||||||||||| ||||| Sbjct 1112 TAGGAAGAACCGGCATCGAAGGATCAAAAATCGACGTCACCATGAACGCTTGGCCGCCAC 1053 Query 198 AAGCCAGTTATCCCTGTGGTAA 219 ||||||||||| |||| |||| Sbjct 1052 AAGCCAGTTATTTCTGTAGTAA 1031 >seq1966 Length=4092 Score = 82.4 bits (90), Expect = 1e-13 Identities = 78/100 (78%), Gaps = 10/100 (10%) Strand=Plus/Minus Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 ||||| || || | ||||| || ||| |||||||||| |||||| || || Sbjct 1284 TCTGCGGCGCTAGGTTAGGAGGAACCGGCATCGAAGGAACAAAAAA-------GC---GA 1235 Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||||||||| ||||||||||||||||||||||||||| || Sbjct 1234 ACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAATTT 1195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854337799680