Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq303 257 1e-63 seq5767 125 6e-24 seq3519 95.1 1e-14 seq921 95.1 1e-14 >seq303 Length=13852 Score = 257 bits (284), Expect = 1e-63 Identities = 529/781 (68%), Gaps = 12/781 (2%) Strand=Plus/Minus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 ||||||||||| | || | || || | |||||| || || |||| || || | ||| Sbjct 11752 CACAAACTTGGACACCGCGATGGAGGCCAAGTTGCACACCGCCGTCTCCTCGGGGGAGGT 11693 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 |||||| | ||| || |||||||| || ||| |||||||| | ||||| || || Sbjct 11692 ATACTCAATAATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGATTCTTCTGGTT 11633 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 ||| ||||| || |||||||||| |||| |||| ||| ||||| | ||||| Sbjct 11632 GGACTTCTCGTTGCACGCGTCCTTGTACAACATGAACGGCACGCCTGTCTCGATCTGGGA 11573 Query 66172 CTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCG 66231 ||| | ||||||| ||| || | | |||| | || || || || | || || Sbjct 11572 CTCGAGGATGGCGAACCAGAGCTCCTGCGCCTGGATGGTGCGCACGCCCATGCCCTTCGC 11513 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGGA 66289 ||||| | |||||||| || ||||| ||| | || || ||| || | || Sbjct 11512 CTCGTAGTCCTCGTAGAGCTGCTCGAAC--TTCTCGCCGTAGCAGTCGCTGAGGCCGGGC 11455 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAG 66348 | ||| || ||||| || ||| | || || || ||| || || ||| || || Sbjct 11454 GTCGTGTTGGGGTCCATCAACGTCCACTTGCCCTCGCTCTTC-ACGCGCTTCATGAACAG 11396 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||| || |||||||| |||||||| || ||||| || || || || || ||||| | Sbjct 11395 ATCGGGGATCCAGAGCGCGTAGAACAGGTCGCGCGCACGCTGGTCGTCCTTGCCGG---T 11339 Query 66409 TTTGCGC---AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 |||||| | | || ||||| |||||||| || ||||| || || ||||| ||||| Sbjct 11338 GTTGCGCTTCATGAGCAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATGGC 11279 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525 ||| | ||| | || || ||||| || || || |||||||| || ||| || | || Sbjct 11278 GAAGGCACCCTTGCGCTTACCGCCGCCCTGATCCACGTAGCGGGCCGTATTATTCCACAC 11219 Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585 ||| | |||||| | ||| ||||| || |||| || |||||| ||||| | || Sbjct 11218 ACGGATCATCGGCATGAGGCCGTTGGACGTGCCGTTCGTGCCGGCGATGTAGCTGCCCGC 11159 Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || || || | ||| || | | ||||| || ||||| | ||| ||| | || || Sbjct 11158 GGCACGGATGTTGTGCACGTGGATGCCAATGCCGCCGGCGGCCTTGCTGATCACGGCGCA 11099 Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 || | || | | ||||| |||||| |||| |||| || | || ||| |||| Sbjct 11098 CTCCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATCGCCACCAGGAAGCA 11039 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || | ||||| ||||| ||| |||| ||||||||||||||| || || || || Sbjct 11038 CGAGCTCATCTGGGGCTTGGGGGTGCCGGCGTTGAAGAGGGTGGGTGTCGCATGGGTGAA 10979 Query 66766 G 66766 | Sbjct 10978 G 10978 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 |||| ||| ||||||||||| || ||||| || || ||||||||||| |||| ||| Sbjct 12306 TTGACGACGGGGAACTCGCCGCTTAGCACACGGCGCACGTAGATGTTGGAGGTGAAGGGC 12247 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 || ||| | || |||| || ||||| || | || || || || ||||| || |||| | Sbjct 12246 TCGAAGCACTCGTTGTTCCCAAGAATCTGCGACGTCGAGGCGGTGGGCATCGGCGCGAGC 12187 Query 65543 AACAATGAGTTTCGCA 65558 | || ||||| |||| Sbjct 12186 AGCAGCGAGTTGCGCA 12171 >seq5767 Length=966 Score = 125 bits (138), Expect = 6e-24 Identities = 582/906 (64%), Gaps = 27/906 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||||||| ||| | || || ||||||| Sbjct 922 GCAGGAGAACCCCTACCGCTACGTGCTCTTCCCCATCCAGTTCCACGACATCTGGCGCAA 863 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | ||||||| |||||||| |||| || || ||| Sbjct 862 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGCTGGAGGAGATCGACCTGGGCAGCGACC 804 Query 61157 TGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGG 61213 | ||||||| ||| | | |||| || || || || ||||| || || ||| | | Sbjct 803 TCGCCGACTGGGTCAAGC--TCACCGAG-GGCGAGCAGCACTTCATCAAGCACGTGCTCG 747 Query 61214 CGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGG 61273 | ||||| |||| ||||| |||||| ||||| | | || ||| | | Sbjct 746 CCTTCTTCGCCGGCAGCGACGGCATCGTCGTCGAGAACCTCGCCGTGCGCTTCATGACCG 687 Query 61274 AGGTGCAAG-TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 | || |||| | | |||||||| ||||||||||||||| | |||||||| || Sbjct 686 ACGT-CAAGATCCCCGAGGCGCGCGCCTTCTACGGCTTCCAGCTCATGATGGAGAACATC 628 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA--GGGAGCGGGCGGAACGTG 61390 ||||| |||| ||| || || |||| || ||||||| | |||| ||| || Sbjct 627 CACTCCGAGACCTACTCGGTGCTGCTCGACACCTACATCACCGACAGCGCCGAGAAGCTG 568 Query 61391 AACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || || | | |||||| |||| || || | || ||| || | |||||| Sbjct 567 --CGCCTGCTGCACGCCATCCAGACCATCCCCTGCATCCAGAAGAAGGCCAACTGGGCCG 510 Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | |||||| ||| | || || | || || || | | | || || | | Sbjct 509 TGCGCTGGATCGGCAG--CGGCGCCT-CCTTCCAGGAGCGCCTCATCGGCTTCGCCGCCG 453 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 ||||||| | || ||| || || || | | ||||| ||| | ||||| || || Sbjct 452 TCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCG 393 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | |||||||| || ||||||||||| ||| | || || |||||||||||| |||| | Sbjct 392 TGATGCCCGGGCTCACCTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCG 333 Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || || |||| | ||| || | | | | | | | ||||| ||| Sbjct 332 ACTTCGCCTGCCTGCTCTACAACAGCCACATCAAGCACAAGCTGCCCCGCGAGCGCGTGC 273 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGCC 61748 | || | || || || ||||| |||| || |||| ||||| |||| Sbjct 272 TCGCCATCATCACCGACGCCGTCGTCATCGAGAAGGAGTTCATCTG--CGACGCGCTGCC 215 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 ||| |||||||||||||| | || ||| ||||| || || || || ||||| Sbjct 214 CGTGCGCCTCATCGGCATGAACGCCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGA 155 Query 61809 CCGTCTGTT--GGTCGATTTGGGT-ATGAAGCGGATCTATAATACGAAAAACCCATTTGA 61865 ||| ||| | |||| | || | ||||| ||| || | | ||||| || || Sbjct 154 CCGCCTGCTCGTGTCGCTCGGGCTCGAGAAGC---ACTACAACGCCACCAACCCCTTCGA 98 Query 61866 TTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGA 61925 |||||||| ||||| ||||| |||||||| || || |||||||| || ||||| Sbjct 97 CTTCATGGAGATGATCTCGCTCACCGGCAAGACCAACTTCTTCGAGAAGAAGGTCGGCGA 38 Query 61926 CTATCA 61931 || || Sbjct 37 GTACCA 32 >seq3519 Length=2121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 230/340 (68%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||||||| ||| | || || ||||||| Sbjct 392 GCAGGAGAACCCCTACCGCTACGTGCTCTTCCCCATCCAGTTCCACGACATCTGGCGCAA 333 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | ||||||| |||||||| |||| || || ||| Sbjct 332 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGCTGGAGGAGATCGACCTGGGCAGCGACC 274 Query 61157 TGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGG 61213 | ||||||| ||| | | |||| || || || || ||||| || || ||| | | Sbjct 273 TCGCCGACTGGGTCAAGC--TCACCGAG-GGCGAGCAGCACTTCATCAAGCACGTGCTCG 217 Query 61214 CGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGG 61273 | ||||| |||| ||||| |||||| ||||| | | || ||| | | Sbjct 216 CCTTCTTCGCCGGCAGCGACGGCATCGTCGTCGAGAACCTCGCCGTGCGCTTCATGACCG 157 Query 61274 AGGTGCAAG-TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 | || |||| | | |||||||| ||||||||||||||| | |||||||| || Sbjct 156 ACGT-CAAGATCCCCGAGGCGCGCGCCTTCTACGGCTTCCAGCTCATGATGGAGAACATC 98 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 ||||| |||| ||| || || |||| || ||||||| Sbjct 97 CACTCCGAGACCTACTCGGTGCTGCTCGACACCTACATCA 58 >seq921 Length=7520 Score = 95.1 bits (104), Expect = 1e-14 Identities = 230/340 (68%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||||||| ||| | || || ||||||| Sbjct 391 GCAGGAGAACCCCTACCGCTACGTGCTCTTCCCCATCCAGTTCCACGACATCTGGCGCAA 332 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | ||||||| |||||||| |||| || || ||| Sbjct 331 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGCTGGAGGAGATCGACCTGGGCAGCGACC 273 Query 61157 TGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGG 61213 | ||||||| ||| | | |||| || || || || ||||| || || ||| | | Sbjct 272 TCGCCGACTGGGTCAAGC--TCACCGAG-GGCGAGCAGCACTTCATCAAGCACGTGCTCG 216 Query 61214 CGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGG 61273 | ||||| |||| ||||| |||||| ||||| | | || ||| | | Sbjct 215 CCTTCTTCGCCGGCAGCGACGGCATCGTCGTCGAGAACCTCGCCGTGCGCTTCATGACCG 156 Query 61274 AGGTGCAAG-TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 | || |||| | | |||||||| ||||||||||||||| | |||||||| || Sbjct 155 ACGT-CAAGATCCCCGAGGCGCGCGCCTTCTACGGCTTCCAGCTCATGATGGAGAACATC 97 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 ||||| |||| ||| || || |||| || ||||||| Sbjct 96 CACTCCGAGACCTACTCGGTGCTGCTCGACACCTACATCA 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397532725779200