Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3065 129 2e-27 seq6029 104 1e-19 >seq3065 Length=2593 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||| |||||||||||||||||| | ||||||||| | |||||| | Sbjct 736 CTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGAAGCCCGGGGAAACCCA 795 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| | |||| | ||| ||||||||||| |||| |||||||||| || ||| Sbjct 796 GGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTAGGATTTGGGTATCGGAGCG 855 Query 683 A 683 | Sbjct 856 A 856 Score = 104 bits (114), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 10/162 (6%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||| | |||||| | Sbjct 182 TGTTTGGGAATGCAGTGTCAAGCTGGCAGGTATTTGTCTGCTAAGGTTAAATACAGAGTG 241 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 242 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 301 Query 165 GTTAAAAAGCACGTGAAATTGT-----TGA-AAGGGAAGCGC 200 || | | || || |||| | || ||| || |||||||| Sbjct 302 GTGACATAGAACCTGAAGTCGTGACAATGACAATGGAAGCGC 343 >seq6029 Length=1125 Score = 104 bits (114), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 10/162 (6%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||| | |||||| | Sbjct 797 TGTTTGGGAATGCAGTGTCAAGCTGGCAGGTATTTGTCTGCTAAGGTTAAATACAGAGTG 856 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 857 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 916 Query 165 GTTAAAAAGCACGTGAAATTGT-----TGA-AAGGGAAGCGC 200 || | | || || |||| | || ||| || |||||||| Sbjct 917 GTGACATAGAACCTGAAGTCGTGACAATGACAATGGAAGCGC 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079814972300