Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5040 280 3e-73 seq4135 280 3e-73 seq6530 107 3e-21 >seq5040 Length=1478 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 860 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 801 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 800 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 741 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 740 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 681 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 680 GTAATTATTCTGACACCTCT 661 >seq4135 Length=1912 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 571 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 630 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 631 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 690 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 691 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 750 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 751 GTAATTATTCTGACACCTCT 770 >seq6530 Length=983 Score = 107 bits (118), Expect = 3e-21 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | | Sbjct 979 AAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAATTAT 920 Query 224 TCTGGCACCTCT 235 |||| ||||||| Sbjct 919 TCTGACACCTCT 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854326299456