Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6879 149 2e-33 seq3159 149 2e-33 seq2773 89.7 2e-15 seq7923 80.6 8e-13 seq7739 80.6 8e-13 seq7224 80.6 8e-13 seq6269 80.6 8e-13 seq5711 80.6 8e-13 >seq6879 Length=887 Score = 149 bits (164), Expect = 2e-33 Identities = 121/144 (84%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 751 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 692 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||||||||| | ||||| | |||||| || |||||| | Sbjct 691 TCTCCGGAATCGAACCCTAATTCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 633 Query 193 ACCATCGA-AAGTTGATAGGGCAG 215 ||||| | || ||||||||||| Sbjct 632 GCCATCAACCAGCTGATAGGGCAG 609 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 359 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 304 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 303 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 267 >seq3159 Length=2523 Score = 149 bits (164), Expect = 2e-33 Identities = 121/144 (84%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 385 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 326 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||||||||| | ||||| | |||||| || |||||| | Sbjct 325 TCTCCGGAATCGAACCCTAATTCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 267 Query 193 ACCATCGA-AAGTTGATAGGGCAG 215 ||||| | || ||||||||||| Sbjct 266 GCCATCAACCAGCTGATAGGGCAG 243 >seq2773 Length=2852 Score = 89.7 bits (98), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 6/144 (4%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||||| | || | |||| ||||| |||||| Sbjct 623 ATTGGGCAATTTGCGCGCCTGCTGCCTTGCGCAGAAGCAATAGCTATTTCTTAGGCTCTT 564 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||||||||| ||| || |||| | ||||| | |||||| || |||||| | Sbjct 563 TCTCCGGAATCG----CTACTTTCCCGCT-CCCGTCAACGCCATGGAAGTCCACTACACG 509 Query 193 ACCATCGA-AAGTTGATAGGGCAG 215 ||||| | || ||||||||||| Sbjct 508 GCCATCAACCAGCTGATAGGGCAG 485 >seq7923 Length=632 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 58 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 113 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 114 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 150 >seq7739 Length=673 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 586 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 531 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 530 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 494 >seq7224 Length=795 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 83 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 138 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 139 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 175 >seq6269 Length=1053 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 2 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 57 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 58 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 94 >seq5711 Length=1228 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 18 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 73 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 74 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510269712896