Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1671 226 2e-54 seq4029 127 2e-24 >seq1671 Length=4299 Score = 226 bits (250), Expect = 2e-54 Identities = 525/782 (67%), Gaps = 12/782 (2%) Strand=Plus/Minus Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 |||||||||||| | || | || || |||||||| || || |||| || || | || Sbjct 2905 CCACAAACTTGGACACCGCGATGGAGGCCAGGTTGCACACCGCCGTCTCCTCCGGCGAGG 2846 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | ||||||| ||| ||||||||||| || ||| |||||||| | |||| || | Sbjct 2845 TGTACTCGATAATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCAAGGTTCTTCTGGT 2786 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | ||| ||||| || |||||||||| |||| | || ||| ||||| | |||| Sbjct 2785 TCGACTTCTCGTTGCAGGCGTCCTTGTACAACATGAAGGGCACGCCCGTCTCGATCTGGG 2726 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC 66230 |||| ||||||||| ||| || | | |||| | || || || || | || || Sbjct 2725 ACTCGATGATGGCGAACCAGAGCTCCTGCGCCTGGATGGTGCGGACGCCCATGCCGC-GC 2667 Query 66231 GT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||| | ||||| || | ||||| || || | ||| || | || Sbjct 2666 GCCTCGTAGTCCTCGTAAAGCTTCTCGAACTCCTCGCCGTAGCAGTCGCTGAGGCCCGGG 2607 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAG 66348 ||| || |||||||| ||| | || || || || || || ||| || || Sbjct 2606 GTGGTGTTGGGGTCCATCAGCGTCCACTTGCCCTCGCTCTTG-ACGCGCTTCATGAAGAG 2548 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGAT 66407 || || ||||| |||||||||||||| ||||| || || || || || |||| ||| Sbjct 2547 GTCGGGGATCCACAGGGCGTAGAAGAGGTCGCGCGCGCGCTGGTCGTCCTTGCCCGTG-- 2490 Query 66408 TTTTGCGCAAG-TCG--AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 |||||| || |||||||| |||| |||||| ||||| || || ||||| || | Sbjct 2489 --TTGCGCTTCATCAGCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTACATCG 2432 Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524 |||| | |||| | || || ||||| || |||||||||||||| || ||||| | | Sbjct 2431 CGAAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTCCACA 2372 Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584 | || | |||||| | ||| ||||| || |||| ||||||||| | ||| | || Sbjct 2371 CGCGGATCATCGGCATGAGGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTAGCTGCCGG 2312 Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || || || | ||| || | | || || || ||||| | ||| ||| | |||| Sbjct 2311 CGGCGCGGATGTTGTGCACGTGGATGCCGATGCCGCCGGCGGCCTTGCTGATCACCGCAC 2252 Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 | || | || | | ||||| |||||| ||| |||| || | || |||| ||| Sbjct 2251 ACTCCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTCATCGCCACGAGGAAGC 2192 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 | || || | || || || || ||| |||| |||||| || || || ||||| || | Sbjct 2191 AGGAGCTCATCTGCGGCTTAGGGGTGCCGGCGTTGAAGAGCGTCGGGGTCGCGTGGGTGA 2132 Query 66765 AG 66766 || Sbjct 2131 AG 2130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| || || ||||| ||||||||||| |||| ||| || ||| | | Sbjct 3448 GGAACTCGCCGCTCAGCACGCGGCGGACGTAGATGTTGGAGGTGAAGGGCTCGAAGCACT 3389 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| || || || | || || || || ||||| || |||| | || |||| Sbjct 3388 CGTTGTTGCCGAGGATCTGCGAGGTCGAGGCTGTGGGCATCGGCGCGAGGAGCAGCGAGT 3329 Query 65553 TTCGCA 65558 | |||| Sbjct 3328 TGCGCA 3323 >seq4029 Length=1979 Score = 127 bits (140), Expect = 2e-24 Identities = 382/581 (66%), Gaps = 19/581 (3%) Strand=Plus/Plus Query 61053 TCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGA 61112 ||| | ||| | ||||||||| ||| | || || ||||||| |||||| || ||| Sbjct 585 TCGCTACGTGCTCTTCCCCATCCAGTTCCACGACATCTGGCGCAAGTACAAGGAGCAGGA 644 Query 61113 -AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGG--- 61168 |||| | | ||||||| |||||||| |||| | || ||| | ||||||| Sbjct 645 GAGCTGCAT-CTGGACGCTGGAGGAGATCGACCTCGGCAGCGACCTCGCCGACTGGGTCA 703 Query 61169 AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTT 61228 ||| | | |||| || || || || ||||| || || ||| | || ||||| |||| Sbjct 704 AGC--TCAGCGAG-GGCGAGCAGCACTTCATCAAGCACGTGCTCGCCTTCTTCGCCGGCA 760 Query 61229 CGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGG 61288 ||||| |||||| ||||| | | || ||| | || || | || | | Sbjct 761 GCGACGGCATCGTCGTCGAGAACCTCGCCGTGCGCTTCATGACCGACGTCAAGGTCCCCG 820 Query 61289 AGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACA 61348 ||||||| ||||||||||||||| | |||||||| ||||||| |||| ||| Sbjct 821 AGGCGCGCGCCTTCTACGGCTTCCAGCTCATGATGGAGAACATCCACTCCGAGACCTACT 880 Query 61349 GTGTTCTCATCGATACGTACATCA--GGGAGCGGGCGGAACGTGAACGATTGTTCAATGC 61406 || || |||| || ||||||| | |||| ||| || || || | | || Sbjct 881 CGGTGCTGCTCGACACCTACATCACCGACAGCGCCGAGAAGCTG--CGCCTGCTGCACGC 938 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 ||| |||| || ||| | || ||| ||| |||||| | |||||| ||| Sbjct 939 CATGCAGACCATCCCGTGCATCCAGAAGAAGGCGAGCTGGGCCGTGCGCTGGATCGGCAG 998 Query 61467 TACAACGGCTACA--TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 |||| || || || || | | | || |||| ||||||||| | || Sbjct 999 -----CGGCGCCAGCTTCCAGGAGCGCCTCATCGGCTTCGCGGCGGTCGAGGGCATCTTC 1053 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 ||| || || || ||| ||||| ||| | ||||| || || | |||||||| || Sbjct 1054 TTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCGTGATGCCCGGCCTC 1113 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 ||||||||||| ||| | || || |||||||||||| |||| Sbjct 1114 ACCTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTGCA 1154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397526203924640