Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq21687 131 7e-28 seq15155 131 7e-28 seq23560 98.7 4e-18 seq21142 98.7 4e-18 seq19720 98.7 4e-18 seq6357 91.5 6e-16 >seq21687 Length=937 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 897 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 838 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 837 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 778 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 777 TTTGGGTATCGGAGCGA 761 >seq15155 Length=25948 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 766 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 707 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 706 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 647 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 646 TTTGGGTATCGGAGCGA 630 >seq23560 Length=729 Score = 98.7 bits (108), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 || |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 614 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 555 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 554 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 495 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 494 GTGACATAGAACCTGAA 478 >seq21142 Length=987 Score = 98.7 bits (108), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 || |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 544 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 485 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 484 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 425 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 424 GTGACATAGAACCTGAA 408 >seq19720 Length=1279 Score = 98.7 bits (108), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 || |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 1079 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 1138 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 1139 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 1198 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 1199 GTGACATAGAACCTGAA 1215 >seq6357 Length=549 Score = 91.5 bits (100), Expect = 6e-16 Identities = 90/114 (79%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 71 TGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAG--AGACCGATAGCGCACAAGTA 128 ||| ||||| | ||| | |||| |||||| | || |||||||||||| ||||||| Sbjct 534 TGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTAGGAAGACCGATAGCGAACAAGTA 475 Query 129 GAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 | |||| |||||| | ||||||||||||||||||||||| | | || || |||| Sbjct 474 GCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGAGTGACATAGAACCTGAA 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079420442450