Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10818 365 1e-98 seq5117 365 1e-98 seq4397 365 1e-98 seq4197 365 1e-98 seq19721 215 2e-53 seq23336 114 4e-23 seq17398 114 4e-23 seq1944 114 4e-23 seq26172 109 2e-21 seq22500 105 2e-20 >seq10818 Length=512 Score = 365 bits (404), Expect = 1e-98 Identities = 300/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | || ||||||||||| ||| || || Sbjct 140 CTTCATTCGATAAGTGAAGCAACGTTCCAAGTGGTGGTATTTCATTTGTGCTTGC---GC 196 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 197 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 256 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 257 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 316 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 317 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 376 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 377 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 436 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 437 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 496 Query 537 CTT 539 ||| Sbjct 497 CTT 499 >seq5117 Length=564 Score = 365 bits (404), Expect = 1e-98 Identities = 300/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | || ||||||||||| ||| || || Sbjct 143 CTTCATTCGATAAGTGAAGCAACGTTCCAAGTGGTGGTATTTCATTTGTGCTTGC---GC 199 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 200 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 259 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 260 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 319 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 320 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 379 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 380 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 439 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 440 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 499 Query 537 CTT 539 ||| Sbjct 500 CTT 502 >seq4397 Length=576 Score = 365 bits (404), Expect = 1e-98 Identities = 300/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | || ||||||||||| ||| || || Sbjct 477 CTTCATTCGATAAGTGAAGCAACGTTCCAAGTGGTGGTATTTCATTTGTGCTTGC---GC 421 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 420 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 361 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 360 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 301 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 300 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 241 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 240 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 181 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 180 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 121 Query 537 CTT 539 ||| Sbjct 120 CTT 118 >seq4197 Length=578 Score = 365 bits (404), Expect = 1e-98 Identities = 300/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | || ||||||||||| ||| || || Sbjct 479 CTTCATTCGATAAGTGAAGCAACGTTCCAAGTGGTGGTATTTCATTTGTGCTTGC---GC 423 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 422 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 363 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 362 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 303 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 302 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 243 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 242 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 183 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 182 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 123 Query 537 CTT 539 ||| Sbjct 122 CTT 120 >seq19721 Length=940 Score = 215 bits (238), Expect = 2e-53 Identities = 144/159 (91%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 || |||||||||||||||||||| |||||| || |||||||||||||||||||||||||| Sbjct 940 TCATTAATCCATTCATGCGCGTCTCTAATTGGAAGACGAGGCATTTGGCTACCTTAAGAG 881 Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||||||||||||||||||||||||||||| | | ||||| || |||| |||||||||| Sbjct 880 AGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGGTGAATCTCGTCACGTTGACATTCA 821 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCA-ACATCACTT 539 ||||||||||||||||||| ||||| || ||| ||||| Sbjct 820 GAGCACTGGGCAGAAATCAGTTTGCGACATACACCACTT 782 >seq23336 Length=825 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 432 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 491 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 492 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 539 >seq17398 Length=703 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 197 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 138 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 137 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 90 >seq1944 Length=621 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 201 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 142 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 141 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 94 >seq26172 Length=703 Score = 109 bits (120), Expect = 2e-21 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 606 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 665 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 104 || |||||||| ||||||||||||||||||||||| || Sbjct 666 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCT 703 >seq22500 Length=877 Score = 105 bits (116), Expect = 2e-20 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 783 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 842 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCC 99 || |||||||| ||||||||||||||||||||| Sbjct 843 GTGTAACAGATATGCCGCCCCAGCCAAACTCCC 875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634758185312