Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq20481 147 7e-33 seq12110 147 7e-33 seq8333 147 7e-33 seq5897 147 7e-33 seq25887 143 8e-32 seq26919 80.6 8e-13 seq23498 80.6 8e-13 seq11844 80.6 8e-13 seq7973 80.6 8e-13 seq3290 80.6 8e-13 >seq20481 Length=1835 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 1585 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 1644 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 1645 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 1703 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 |||||| | ||||||||||| Sbjct 1704 GCCATCGCTGGCTGATAGGGCAG 1726 >seq12110 Length=502 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 4 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 63 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 64 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 122 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 |||||| | ||||||||||| Sbjct 123 GCCATCGCTGGCTGATAGGGCAG 145 >seq8333 Length=531 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 14 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 73 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 74 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 132 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 |||||| | ||||||||||| Sbjct 133 GCCATCGCTGGCTGATAGGGCAG 155 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 401 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 456 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 457 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 493 >seq5897 Length=554 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 15 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 74 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 75 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 133 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 |||||| | ||||||||||| Sbjct 134 GCCATCGCTGGCTGATAGGGCAG 156 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 401 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 456 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 457 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 493 >seq25887 Length=713 Score = 143 bits (158), Expect = 8e-32 Identities = 119/143 (83%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 695 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 636 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||||||||||||||||| |||||| | ||||| | |||||| || |||||| | Sbjct 635 TCTCCGGAATCGAACCCTAA-TCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 578 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 |||||| | ||||||||||| Sbjct 577 GCCATCGCTGGCTGATAGGGCAG 555 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 310 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 255 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 254 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 218 >seq26919 Length=1034 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 40 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 95 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 96 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 132 >seq23498 Length=817 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 740 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 685 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 684 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 648 >seq11844 Length=504 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 187 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 132 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 131 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 95 >seq7973 Length=534 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 436 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 381 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 380 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 344 >seq3290 Length=594 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 296 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 241 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 240 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509991905024