Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq15458 87.8 2e-12 >seq15458 Length=27458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 251/386 (65%), Gaps = 0/386 (0%) Strand=Plus/Minus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 ||||||| || |||||||| ||||| || || || |||||| || |||| || | Sbjct 23951 TCTACCAGGCAAGCACCAGCGAGCTCTACGGCAAGGTGCAGGAGGTGCCGCAGACGGAGA 23892 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 || || | | || || ||| || | || || || || || | || ||||||| Sbjct 23891 AGACGCCCTTCCACCCGCGCAGCCCGTACGCGGTGGCGAAGCTGTACGCCTTTTGGATCA 23832 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 |||||| | || || | || ||| | | ||| ||||| ||||| |||| Sbjct 23831 CAGTGAACTACCGTGAGTCGTACGGTATTTTTGCGTGCAACGGCATTCTGTTCAACCACG 23772 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | |||| | || | |||||| || || ||||| || || || | || | Sbjct 23771 AGTCGCCACGACGCGGCGCGACGTTTGTGACGAAGAAGATAGTGCGGGCTGCGGTGCGCA 23712 Query 162695 TTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGG 162754 | | ||| || || | || || | ||||| ||| | ||||||| |||||||||| Sbjct 23711 TCAAGAAGGGTCTGCAGAAGGAGCTGCTTCTTGGCAACGTGAATGCCCTGCGTGACTGGG 23652 Query 162755 GACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATG 162814 | ||||| || |||||||| | | |||||| | ||||| ||| |||| ||| || | Sbjct 23651 GGCACGCGAAGGACTACGTGCACGGCATGTGGCTCATGCTGCAGGCGGAGAGGCCTGACG 23592 Query 162815 ATTATGTGATCGCAACTGGTGAGCAG 162840 | | ||| | || || || |||||| Sbjct 23591 ACTGGGTGCTGGCGACGGGCGAGCAG 23566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691225668298440