Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq26702 183 6e-44 >seq26702 Length=1464 Score = 183 bits (202), Expect = 6e-44 Identities = 218/288 (76%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 34 TCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC---CAGGACTTTTACTTTGAAAAAATT 90 |||| ||||| || | |||||| |||||| | | | ||||||||||| ||||| Sbjct 366 TCCGGATGCCTTTAAACGGGTGTC---GGGAGCGGACGGCATCTTTACTTTGAACAAATT 422 Query 91 AGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGGAATAATAGAATAGGAC 148 ||||| ||||||||||||| || | ||| | | |||||||||||| |||||||| Sbjct 423 TGAGTGCTCAAAGCAGGCCTATGTGCCTGAAAATTCTTGCATGGAATAATGAAATAGGAC 482 Query 149 GTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATTAATAGGGATAGTCGGG 207 | |||||||||||||||||||| | ||| ||| |||||| |||| ||||| || |||| Sbjct 483 TT-CGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGTTAAGAGGGACAGACGGG 540 Query 208 GGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGC 267 || | |||| ||| |||||||||||||| |||| |||| |||||| || Sbjct 541 GGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTGGGATCGCCGCCAGACAAACTACAGC 600 Query 268 GAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 |||||| || ||||| ||||||||||| ||||| || ||||||| || Sbjct 601 GAAAGCATTTGCCAAGAATGTTTTCATTGATCAG-GAGCGAAAGTCAG 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914930061760