Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02]
29,495 sequences; 89,937,456 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq24850 848 0.0
seq27875 131 7e-28
seq17968 131 7e-28
seq591 131 7e-28
seq28560 122 4e-25
seq26076 98.7 4e-18
seq25003 98.7 4e-18
seq9077 98.7 4e-18
>seq24850
Length=1243
Score = 848 bits (940), Expect = 0.0
Identities = 588/665 (88%), Gaps = 1/665 (0%)
Strand=Plus/Plus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
|| || |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 18 CCATGCGAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTA 77
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 78 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 137
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| | |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct 138 AGGTTAAAAGCACCTTGAAAAGGGAGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCG 197
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGC 259
|||||||||||||| | || | ||||| | ||| ||| ||| |||| |
Sbjct 198 CTTGCAACCAGACTCGGTCGTGGGGGCTCAGCGGGCATGCGTGCCCGTGTACTCCCCCAT 257
Query 260 GGTCAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
| || || |||||||||| || |||||| || |||||||| | ||||||| | ||| |
Sbjct 258 GCTCCGGGCCAGCATCAGTTCTGGCGGTTGGTTAAAGGCCTCTGGAATGTATCGTCCTCC 317
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
||| || |||||||| |||| | ||||||||| ||| ||||||||| |||||| ||||
Sbjct 318 GGGACGTCTTATAGCCAGGGGCGCAATGCGGCCAGCCGGGACTGAGGAACGCGCTTCGGC 377
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 378 ACGGATGCTGGCATAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 437
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|||| | ||||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct 438 CATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGGG 497
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 498 AGCCCGCAAGGGTGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 557
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 GTGGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 617
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 618 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 677
Query 679 GGCGA 683
|||||
Sbjct 678 GGCGA 682
>seq27875
Length=1739
Score = 131 bits (144), Expect = 7e-28
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
|||||| ||| | ||||| ||||||||||| |||||||||||||||||| | |||||
Sbjct 775 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 716
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| |
Sbjct 715 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 656
Query 667 TTTGGGTATAGGGGCGA 683
||||||||| || ||||
Sbjct 655 TTTGGGTATCGGAGCGA 639
Score = 98.7 bits (108), Expect = 4e-18
Identities = 106/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107
|| |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | |
Sbjct 1402 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 1343
Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164
| |||||||||||| |||||||| |||| |||||| | |||||||||||||||||||||
Sbjct 1342 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 1283
Query 165 GTTAAAAAGCACGTGAA 181
|| | | || || ||||
Sbjct 1282 GTGACATAGAACCTGAA 1266
>seq17968
Length=979
Score = 131 bits (144), Expect = 7e-28
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
|||||| ||| | ||||| ||||||||||| |||||||||||||||||| | |||||
Sbjct 119 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 178
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| |
Sbjct 179 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 238
Query 667 TTTGGGTATAGGGGCGA 683
||||||||| || ||||
Sbjct 239 TTTGGGTATCGGAGCGA 255
>seq591
Length=266238
Score = 131 bits (144), Expect = 7e-28
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
|||||| ||| | ||||| ||||||||||| |||||||||||||||||| | |||||
Sbjct 241852 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 241911
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| |
Sbjct 241912 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 241971
Query 667 TTTGGGTATAGGGGCGA 683
||||||||| || ||||
Sbjct 241972 TTTGGGTATCGGAGCGA 241988
>seq28560
Length=2228
Score = 122 bits (134), Expect = 4e-25
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
|||||| ||| | ||||| | |||||||| |||||||||||||||||| | |||||
Sbjct 2208 TTGAGTTTGAGTGTGCCTGTTTGACCCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 2149
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| |
Sbjct 2148 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 2089
Query 667 TTTGGGTATAGGGGCGA 683
||||||||| || ||||
Sbjct 2088 TTTGGGTATCGGAGCGA 2072
>seq26076
Length=1367
Score = 98.7 bits (108), Expect = 4e-18
Identities = 106/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107
|| |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | |
Sbjct 357 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATAAAGAGTA 298
Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164
| |||||||||||| |||||||| |||| |||||| | |||||||||||||||||||||
Sbjct 297 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 238
Query 165 GTTAAAAAGCACGTGAA 181
|| | | || || ||||
Sbjct 237 GTGACATAGAACCTGAA 221
>seq25003
Length=1256
Score = 98.7 bits (108), Expect = 4e-18
Identities = 106/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Plus
Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107
|| |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | |
Sbjct 901 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 960
Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164
| |||||||||||| |||||||| |||| |||||| | |||||||||||||||||||||
Sbjct 961 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 1020
Query 165 GTTAAAAAGCACGTGAA 181
|| | | || || ||||
Sbjct 1021 GTGACATAGAACCTGAA 1037
>seq9077
Length=853
Score = 98.7 bits (108), Expect = 4e-18
Identities = 106/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107
|| |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | |
Sbjct 386 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 327
Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164
| |||||||||||| |||||||| |||| |||||| | |||||||||||||||||||||
Sbjct 326 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 267
Query 165 GTTAAAAAGCACGTGAA 181
|| | | || || ||||
Sbjct 266 GTGACATAGAACCTGAA 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079367332250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |