Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq14279 313 6e-83 >seq14279 Length=928 Score = 313 bits (346), Expect = 6e-83 Identities = 301/381 (79%), Gaps = 10/381 (3%) Strand=Plus/Minus Query 22 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC 81 ||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||| Sbjct 388 GGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTCGCAAGCGTTATCCGGAATTAT 329 Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||||||||||||| || |||| ||| |||| | || || ||||||| ||||| |||| Sbjct 328 TGGGCGTAAAGCGTTCGTAGGCTGTTTATTAAGTCTGGAGTCAAATCCCAGGGCTCAACC 269 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 || | || || | |||| |||||||| | ||||| | ||||||||| || Sbjct 268 CTGGC-TCGCTTTGGATACTGGTAAACTAGAGTTAGATAGAGGTAAGCGGAATTCCATGT 210 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 | ||| ||||||||||||||||| |||| ||||||||| |||||||||||| ||||| Sbjct 209 GAAGCGGTGAAATGCGTAGATATATGGAAGAACACCAAAGGCGAAGGCAGCTTACTGGGT 150 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 | ||||||||| | | |||||||||||||||||||||||||||||||||||||||||| Sbjct 149 CTATACTGACGCTGAGGGACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 90 Query 322 CCACGCCCTAAACGAT-ATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGCTA 380 ||||||| |||||||| ||| | |||| | ||| | | ||| || ||| ||||| Sbjct 89 CCACGCCGTAAACGATGATC-ATTAGTCGGTGGAG----AGTTCACTG---ACGCAGCTA 38 Query 381 ACGCGTGAAGTTGACCGCCTG 401 |||| | || | ||||||| Sbjct 37 ACGCATTAAATGATCCGCCTG 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289219632480