Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq26702 194 3e-47 seq26429 98.7 2e-18 seq24781 98.7 2e-18 seq24667 98.7 2e-18 seq27129 73.4 6e-11 >seq26702 Length=1464 Score = 194 bits (214), Expect = 3e-47 Identities = 113/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 1014 CTATTTAGCAGGTTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 955 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 954 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 898 Score = 98.7 bits (108), Expect = 2e-18 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| |||||| |||||||| |||| ||||| | |||||||||||||||||||| Sbjct 1224 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACATCTAAGGGCATCACAGA 1165 Query 62 CCTGTTATTGCCTCAA 77 |||||||||| ||||| Sbjct 1164 CCTGTTATTG-CTCAA 1150 >seq26429 Length=1417 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 1210 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 1151 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 1150 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 1112 >seq24781 Length=1237 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 926 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 985 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 986 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 1024 >seq24667 Length=1228 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 649 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 590 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 589 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 551 >seq27129 Length=1542 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA-GGGCATCACAGACCTGTTATTGC 72 || |||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||||| Sbjct 1069 CATTGTAGCACGCGTGCAGCCCAGAGCATCTAAAGGGCATCACGGACCTGTTATTGC 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796572328095