Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq27740 280 3e-73 seq26081 280 3e-73 seq25709 280 3e-73 seq20581 280 3e-73 seq19080 280 3e-73 seq16774 280 3e-73 seq625 280 3e-73 >seq27740 Length=1696 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 1594 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 1535 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 1534 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 1475 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1474 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 1415 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 1414 GTAATTATTCTGACACCTCT 1395 >seq26081 Length=1368 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 987 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 1046 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 1047 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 1106 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1107 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 1166 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 1167 GTAATTATTCTGACACCTCT 1186 >seq25709 Length=1324 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 330 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 271 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 270 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 211 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 210 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 151 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 150 GTAATTATTCTGACACCTCT 131 >seq20581 Length=1033 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 689 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 630 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 629 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 570 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 569 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 510 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 509 GTAATTATTCTGACACCTCT 490 >seq19080 Length=999 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 203 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 262 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 263 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 322 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 323 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 382 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 383 GTAATTATTCTGACACCTCT 402 >seq16774 Length=962 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 494 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 435 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 434 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 375 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 374 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 315 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 314 GTAATTATTCTGACACCTCT 295 >seq625 Length=456718 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 453395 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 453336 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 453335 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 453276 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 453275 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 453216 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 453215 GTAATTATTCTGACACCTCT 453196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854147994720