Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq14279 183 6e-44 >seq14279 Length=928 Score = 183 bits (202), Expect = 6e-44 Identities = 229/311 (74%), Gaps = 11/311 (4%) Strand=Plus/Plus Query 4 GTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAG 63 |||||| ||||| | |||| | ||||||| ||||| ||| |||||||||||||||||||| Sbjct 495 GTCGCTCCATCAAGCTTTCGCTCATTGTGGAATATTCCCTACTGCTGCCTCCCGTAGGAG 554 Query 64 TCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGT 123 | |||||||| |||||||||||||||||||||||| ||||| ||||||| ||| | Sbjct 555 TTTGGGCCGTATCTCAGTCCCAATGTGGCCGTTCAGTCTCTCGACCCGGCTAAACATCAT 614 Query 124 CGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG 183 | |||||| ||| |||| | |||||||| ||||| |||| | |||| | |||| Sbjct 615 AGTCTTGGTAGGCCATTACCCTACCAACTAACTAATGTTCCGCACCCTCATCCTCTAGCG 674 Query 184 -----ATAAA---TCTTTGGTCAA-AGAATGATGCCATCCTCTGACATTATGCGGTATTA 234 |||| || || ||| |||| |||| || | || ||| ||| |||| Sbjct 675 GAGCTTTAAAGGCTCCTTTCACAACGGAATCATGCGATTCCATG--CGTATCCGGCATTA 732 Query 235 GCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCC 294 || ||||||| | ||||||| ||| || || || || |||||||||||||||| Sbjct 733 GCCAATGTTTCCATTGGGTATTCCAATCTAAAGGGTAGATTAAGCACGTGTTACTCACCC 792 Query 295 GTCCGCCACTA 305 | |||| ||| Sbjct 793 ATTCGCCGCTA 803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998105521920