Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq14279 250 7e-64 >seq14279 Length=928 Score = 250 bits (276), Expect = 7e-64 Identities = 269/358 (75%), Gaps = 26/358 (7%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||||| ||||| ||| ||||||| | | ||| |||||| ||||| Sbjct 650 ATTAGTTAGTTGGTAGGGTAATGGCCTACCAAGACTATGATGTTTAGCCGGGTCGAGAGA 591 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||| |||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||| Sbjct 590 CTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGG 531 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 |||||| ||||||| || ||||| ||||| ||| || | ||||| ||||||||| |||| Sbjct 530 AATATTCCACAATGAGCGAAAGCTTGATGGAGCGACACAGCGTGCACGATGAAGGTCTTC 471 Query 348 GGGTCGTAAAGCTCTGT---------------CC---TCAAGGAA-------GATAATGA 382 || | |||||| |||| || | ||||| | ||| Sbjct 470 GGATTGTAAAGTGCTGTTATAGGGAAAGAACACCTGGTTGAGGAAATGCTTCCAGGCTGA 411 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 |||||| || |||| ||||||||| |||||||||||||||||||||| |||| Sbjct 410 CGGTACCCTGTCAGAAAGCGATGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGT 351 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 || ||||||||||||||||| | |||||||||| || |||||| |||| ||||||| Sbjct 350 CGCAAGCGTTATCCGGAATTA-TTGGGCGTAAAGCGTTCGTAGGCTGTTTATTAAGTC 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497158282880