Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq14279 322 1e-85 >seq14279 Length=928 Score = 322 bits (356), Expect = 1e-85 Identities = 310/391 (79%), Gaps = 14/391 (4%) Strand=Plus/Minus Query 20 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 79 ||||||||| |||||||||||||||||||||| |||| || ||||||||||||||||| Sbjct 388 GGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTCGCAAGCGTTATCCGGAATTAT 329 Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||||||||| || |||||| |||| ||||||| | || ||| | | ||||||||| Sbjct 328 TGGGCGTAAAGCGTTCGTAGGCTGTTTATTAAGTCTGGAGTCAAATCCCAGGGCTCAACC 269 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 | || | ||||| || |||| ||||||| || || ||| |||||||| || Sbjct 268 CTGGCTC-GCTTTGGATACTGGTAAACTAGAGTTAGATAGAGGTAAGCGGAATTCCATGT 210 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 | ||||||||||||||||||||| ||| |||||||| ||||||||| |||| |||| Sbjct 209 GAAGCGGTGAAATGCGTAGATATATGGAAGAACACCAAAGGCGAAGGCAGCTTACTGGG- 151 Query 260 TGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 | || |||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 150 TCTATACTGACGCTGAGGGACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 91 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGG-GGCGCATAAGTGCTCCGGTGCCGCAG 377 ||||||||||||||||||| | || ||||| || | ||| | | || ||||| Sbjct 90 TCCACGCCGTAAACGATGATCATTA---GTCGGTGGAG----AGTTCAC---TGACGCAG 41 Query 378 CAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | |||||| ||| | ||| |||| | |||| Sbjct 40 CTAACGCATTAAATGATCCGCCTGAGTAGTA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202845116160