Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq26702 190 4e-46 seq27129 95.1 2e-17 >seq26702 Length=1464 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 1110 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 1167 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 1168 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 1227 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 1228 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 1287 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 1288 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 1347 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 1348 GATTACGTCCCTGCCCTTTGTA 1369 >seq27129 Length=1542 Score = 95.1 bits (104), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 9/235 (4%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC-TTAGATGTTCTGGGCCGC 154 ||| | |||||| | ||||||||||||| ||||||||| ||||||| ||||||| || Sbjct 995 AGCAGGTGGAAGAGGGTAGCAATAACAGGTCCGTGATGCCCTTTAGATGCTCTGGGCTGC 1054 Query 155 ACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA-AGGTCTGGGTAA 213 ||||| |||||| || || ||| || | | ||| || ||| | || Sbjct 1055 ACGCGTGCTACAATGTTAGGATCAA-TAGGACTGC----GAGCCTGAGAGGGTGCGCTAC 1109 Query 214 TCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273 |||| ||| | || ||| | ||||| || ||| ||| | | || | ||| |||| Sbjct 1110 TCTT-ATAATCCCTAACGTAGTTGGGATTGACGTTTGTAATCAGCG-TCATGAACCAGGA 1167 Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| |||| | |||||| || | | |||||| ||||||||||||||||||| Sbjct 1168 ATCCCTTGTAAATGTGTGTCAACAACGCACGTTGAATACGTCCCTGCCCTTTGTA 1222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946920623360