Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq28560 361 2e-97 seq27740 361 2e-97 seq20581 114 4e-23 seq19080 114 4e-23 seq16774 114 4e-23 seq625 114 4e-23 seq26081 77.0 1e-11 >seq28560 Length=2228 Score = 361 bits (400), Expect = 2e-97 Identities = 281/333 (84%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 208 GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 || ||||||||||| ||| || ||| |||| ||| ||||||||| | ||| Sbjct 29 GTGGTGGTATTTCATTTGTGCTTGC---GCTTCCACCTATACTACACCTCAGATGTCGCC 85 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 |||| || | |||| ||||||| ||||||||||||||||||||||||| | || ||| Sbjct 86 GCACAGAGCCAGACTGGAGTCAAACTCAACAGGGTCTTCTTTCCCCGCTTAGCCCTTCAA 145 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 | ||||||||||| |||| |||||||||||||||| | ||||||| ||||||||| ||| Sbjct 146 GTCCGTTCCCTTGACTGTCGTTTCGCTAGATAGTAACTCGGGACAGAGGGAATCTCATTA 205 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 ||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| Sbjct 206 ATCCATTCATGCGCGTCTCTAATTGGAAGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 265 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 ||||||||||||||||||||||||| | | ||||| || |||| |||||||||||||||| Sbjct 266 AGTTACTCCCGCCGTTTACCCGCGCGTCGGTGAATCTCGTCACGTTGACATTCAGAGCAC 325 Query 508 TGGGCAGAAATCACATTGCGTCA-ACATCACTT 539 ||||||||||||| ||||| || ||| ||||| Sbjct 326 TGGGCAGAAATCAGTTTGCGACATACACCACTT 358 >seq27740 Length=1696 Score = 361 bits (400), Expect = 2e-97 Identities = 299/363 (82%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | || ||||||||||| ||| || || Sbjct 906 CTTCATTCGATAAGTGAAGCAACGTTCCAAGTGGTGGTATTTCATTTGTGCTTGC---GC 850 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 849 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 790 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 789 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 730 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 729 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 670 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 669 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 610 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 |||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 609 TGAACCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 550 Query 537 CTT 539 ||| Sbjct 549 CTT 547 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 1292 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 1233 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 1232 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 1185 >seq20581 Length=1033 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 387 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 328 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 327 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 280 >seq19080 Length=999 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 505 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 564 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 565 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 612 >seq16774 Length=962 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 192 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 133 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 132 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 85 >seq625 Length=456718 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 453093 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 453034 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 453033 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 452986 >seq26081 Length=1368 Score = 77.0 bits (84), Expect = 1e-11 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | ||||| |||||||||||| | Sbjct 1289 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAAGACACCTGCGTTGTC 1348 Query 67 GTTTAACAGATGTGCCGCCC 86 || |||||||| |||||||| Sbjct 1349 GTGTAACAGATATGCCGCCC 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634717697760