Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq995 98.7 2e-18 seq994 98.7 2e-18 seq993 98.7 2e-18 seq992 98.7 2e-18 seq991 98.7 2e-18 seq818 98.7 2e-18 seq817 98.7 2e-18 seq816 98.7 2e-18 seq762 98.7 2e-18 seq761 98.7 2e-18 seq619 98.7 2e-18 seq615 98.7 2e-18 seq614 98.7 2e-18 seq592 98.7 2e-18 >seq995 Length=21786 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 5835 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 5894 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 5895 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 5933 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 19991 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 20050 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 20051 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 20089 >seq994 Length=16576 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9676 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9735 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9736 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9774 >seq993 Length=17991 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 10760 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 10819 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 10820 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 10858 >seq992 Length=17059 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9248 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9189 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9188 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9150 >seq991 Length=10477 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9571 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9512 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9511 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9473 >seq818 Length=14441 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 2328 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 2269 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 2268 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 2230 >seq817 Length=18287 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 2613 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 2554 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 2553 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 2515 >seq816 Length=13076 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9519 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9460 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9459 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9421 >seq762 Length=24566 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 5776 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 5835 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 5836 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 5874 >seq761 Length=141961 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 140035 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 140094 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 140095 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 140133 >seq619 Length=12438 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9656 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9597 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9596 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9558 >seq615 Length=15439 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 11519 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 11460 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 11459 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 11421 >seq614 Length=15156 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 9669 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 9610 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 9609 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 9571 >seq592 Length=22661 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 7182 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 7241 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 7242 CCACCATTCAGGGGATCGAGAAAGAACACTCAATCTGTC 7280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792049430