Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq14687 131 7e-28 seq13133 131 7e-28 seq12509 131 7e-28 seq8195 95.1 5e-17 >seq14687 Length=1054 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 28 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 87 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 88 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 147 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 148 TTTGGGTATCGGAGCGA 164 >seq13133 Length=3637 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 1395 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 1336 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 1335 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 1276 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 1275 TTTGGGTATCGGAGCGA 1259 Score = 98.7 bits (108), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 || |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 1957 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 1898 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 1897 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 1838 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 1837 GTGACATAGAACCTGAA 1821 >seq12509 Length=3523 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 932 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 873 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||||| ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 872 AGCCCGGGGAAACTCGGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCATGA 813 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 812 TTTGGGTATCGGAGCGA 796 >seq8195 Length=504 Score = 95.1 bits (104), Expect = 5e-17 Identities = 104/135 (77%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 || |||||| ||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 135 TGCTTGGGAGTGCAGTGTCAAGCTGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTA 76 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAG-ATGAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| |||||||||||||||||||||| Sbjct 75 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 16 Query 165 GTTAAAAAGCACGTG 179 || | | || || || Sbjct 15 GTGACATAGAACCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079503346700