Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11292 176 4e-39 seq5537 132 4e-26 >seq11292 Length=3062 Score = 176 bits (194), Expect = 4e-39 Identities = 593/911 (65%), Gaps = 13/911 (1%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| ||||||||| |||| ||| | || || || | || | ||| Sbjct 1684 GAACCGCTTCTGCGCGAGAATCCTGACCGTTACGTGATCTTTCCGATTAAATACCACGAT 1625 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||| | |||||| |||| ||| | |||||||||||||||| |||| ||| Sbjct 1624 ATCTGGAAGAAGTACAAGGAGGCCGAAAGCAGCATCTGGACGGTGGAGGAAATCGACTTG 1565 Query 61147 TCCAAAGACATGAATGACTGGGAGC-GTTTATCGAGCGGTGAACAACATTTCATTAAACA 61205 || ||| || |||||||| | | | |||| || || ||| || || || Sbjct 1564 AGCAGTGACTTGGCGGACTGGGAAAAGATGAGCGAGGGG-GAGAGGTTTTTTATCAAGCA 1506 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 ||| ||||||||||||| || || || || || ||||| | | | || || Sbjct 1505 CGTGCTGGCGTTCTTTGCTGCAAGTGATGGAATTGTGCTGGAGAACCTGGCGCAGCGGTT 1446 Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 | | ||| || ||||| |||||| |||||| |||||||| |||||||||||||| || Sbjct 1445 CATGACGGAAGTACAAGTACCGGAGGTGCGTTGCTTCTACGGGTTCCAGATTGCCATTGA 1386 Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA 61385 ||| || || ||||| | ||| || || | || | |||||| | ||| | | |||| Sbjct 1385 GAACGTACATTCGGAAACATACTCGGTGCTGTTGGACATGTACATTACGGATCCGACGGA 1326 Query 61386 ACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTG 61445 || || || | | ||||| || || || | || || || | || Sbjct 1325 GAAGGACCGTATGCTGCACGCCATTTCAACAATTCCATGCATTCAGAAAAAGGCCAACTG 1266 Query 61446 GGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGC 61505 ||| | |||||| ||| || | | | | |||| ||||| | | || ||||| Sbjct 1265 GGCGATTCGGTGGATCCGCAG--CAGCAG-TTCGTTTGCCGAACGTCTTGTTGCCTTTGC 1209 Query 61506 GGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACG 61565 || ||| || ||| | || || || || || ||| | |||||| |||||||||| Sbjct 1208 GGCGGTGGAAGGTATTTTCTTTTCCGGCTCCTTCTGCGCGCTGTTTTGGCTGAAGAAACG 1149 Query 61566 TGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 || || |||||||| ||||| ||||| ||||| | || || || ||||| ||| |||| Sbjct 1148 GGGCCTGATGCCCGGGCTGACTTTCAGTAATGAACTCATTTCGCGTGACGAAGGCTTGCA 1089 Query 61626 TTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCG 61685 || ||||| || | | | || ||| | ||||| | | ||||||| Sbjct 1088 CACGGACTTTGCGTGCCTGTTGTACGAAAACTACATTGTGAACAAGCTACCAAAGGAGCG 1029 Query 61686 TGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCT 61743 | | | || ||| || | ||||| ||| || | || || |||| |||||| Sbjct 1028 TATTCGCGATATTATTTGCAGTGCGGTGGATATTGAGCGTGAGTTCATCTG--TGACGCC 971 Query 61744 TTGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGT 61802 | || || | | || ||||| | ||| || ||||| ||| || || ||||| Sbjct 970 ATCCCTGTGCGGTTGCTGGGGATGAA-CGCGGACCTGATGTCAACGTACATCGAGTTTGT 912 Query 61803 TGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCAT 61861 || ||||| |||||| | | | |||| ||| |||| ||| || | || ||||||| Sbjct 911 GGCAGACCGACTGTTGTTGGCACTTGGCAATG-AGCGTCACTACAACTCAAAGAACCCAT 853 Query 61862 TTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAG 61921 | || || ||||| ||||| || || | || ||||| || || || || || || | Sbjct 852 TCGACTTTATGGAAATGATCTCATTGCAGGGAAAGACAAACTTCTTTGAAAAGAAGGTCG 793 Query 61922 GCGACTATCAA 61932 | || |||||| Sbjct 792 GTGAATATCAA 782 >seq5537 Length=6528 Score = 132 bits (146), Expect = 4e-26 Identities = 414/636 (65%), Gaps = 4/636 (1%) Strand=Plus/Minus Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 ||||||| ||||| |||| || ||||||||||| || || | ||| || | | Sbjct 5001 CCACAAAGCGTGGAAGTGCAATGGAGGCGAGGTTGCACACCGCAACCTCATCCTTTGATG 4942 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 ||||||| | ||| || ||||| || || ||| ||| || | ||||| |||| Sbjct 4941 TATACTCTATAATCTCCGTGCAAAGGTTCGAGCACTTGATGACTCCAATATTCTTCTGAT 4882 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | || || || |||||||||||||| | |||| | || ||| || || | || | Sbjct 4881 TTGATTTACGGTTACATGCATCCTTGTAAAGCATGAAAGGGACGCCCGTTTCCATCTGCG 4822 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTG 66229 | || | || || ||| || | | || | ||| || | | |||| | | || Sbjct 4821 ATTCGAGTATAGCAAACCACAGGGATTGAGCTTGCACAGT-CTTCACGCCTCGATTTTCC 4763 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | |||||| ||||| | | | || ||||| | || ||| | ||| Sbjct 4762 CTTTCGTACCCCTCGTATAACTTCTTAAAATCATCACCGTAGCAGTCACTCAGTCCTGGC 4703 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAG 66348 | | || || ||||| || ||| | || | || ||| ||||| ||| || || Sbjct 4702 GCCGTATGCGGGTCCATCAACGTCCACTTTCCTCCGCTCTTC-ACACGCTCCATGAAGAG 4644 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||||| ||||| || ||||| || | ||| || || | || || || | ||| ||| Sbjct 4643 GTCAGGAATCCAAAGAGCGTAAAACAAATCTCGCGCCCTCTGGTCTTCCTTACCGGTATT 4584 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||| ||| || || | |||||| || ||||||| || || | ||||||||| || Sbjct 4583 TTTCTTCAAAAGAAGAAAATTAAAGATATCACCATGCCAAGGCTCTAAGTAGATGGCAAA 4524 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 | ||| |||||||||| || |||||||| || ||||| || || || | ||||| Sbjct 4523 GGCGCCTTTACGTTTGCCACCGCCTTGGTCTACATAGCGTGCCGTGTTATTCCAAACACG 4464 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 | ||||||||| || ||||| || | |||||| || || | ||| | ||| Sbjct 4463 TAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCCAGCAATGTAGCTTCCAGAACA 4404 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 || |||| ||| |||| | ||||||||||| || Sbjct 4403 GCGGATATTGTGCACATGAACGCCAATACCACCAGC 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455810534560