Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq10799 93.3 6e-14 >seq10799 Length=11388 Score = 93.3 bits (102), Expect = 6e-14 Identities = 252/386 (65%), Gaps = 0/386 (0%) Strand=Plus/Minus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 ||||||| || |||||||| ||||| ||||| || |||||| || |||| || | Sbjct 7794 TCTACCAGGCAAGCACCAGCGAGCTCTATGGCAAGGTGCAGGAGGTGCCGCAGACGGAGA 7735 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 || || | | || || ||| || | || || || || || | || ||||||| Sbjct 7734 AGACGCCCTTCCACCCGCGCAGCCCGTACGCGGTGGCAAAGCTGTACGCCTTTTGGATCA 7675 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 |||||| | || || | || ||| | | ||| |||||||| || |||| Sbjct 7674 CAGTGAACTACCGTGAGTCGTACGGTATGTTTGCGTGCAACGGCATTCTATTTAACCACG 7615 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | |||| | || | |||||| || || ||||| || || || | || | Sbjct 7614 AGTCGCCACGACGCGGCGCGACGTTTGTGACGAAGAAGATTGTGCGGGCTGCGGTGCGCA 7555 Query 162695 TTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGG 162754 | | ||| || || | || || | ||||| ||| | ||||||| |||||||||| Sbjct 7554 TCAAGAAGGGCCTGCAGAAGGAGCTGCTTCTTGGCAACGTGAATGCCCTGCGTGACTGGG 7495 Query 162755 GACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATG 162814 | ||||| || ||||| || | | |||||| | ||||| ||| |||||||| || | Sbjct 7494 GGCACGCGAAGGACTATGTGTACGGCATGTGGCTCATGCTGCAGGCGGAGAAGCCTGACG 7435 Query 162815 ATTATGTGATCGCAACTGGTGAGCAG 162840 | | ||| | || || || |||||| Sbjct 7434 ACTGGGTGCTGGCGACGGGCGAGCAG 7409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691259074421040