Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1368 163 6e-38 >seq1368 Length=2263 Score = 163 bits (180), Expect = 6e-38 Identities = 214/296 (72%), Gaps = 23/296 (8%) Strand=Plus/Plus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||| ||| |||||| | ||| |||||||||||||||||||||||| || Sbjct 144 TCGTTACGCCATTCATGCAGGTCGGCATTTAACCGACAAGGAATTTCGCTACCTTAAGAG 203 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||| ||||| ||||||||||| || || ||||| || ||| || | Sbjct 204 GGTTATTGTTACCCCCGCCGTTTACCGGTGC-----TTCAC----CCGGTTG---TACCC 251 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 | ||| || | || |||| ||||||||||| || || |||| ||| || | Sbjct 252 G---GGCTTCACATACCGGCACTGGGCAGGCGTCGGCCCCAGTACAAACCCTTTCGGGCT 308 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG----- 296 ||| | |||||||||||| |||||||||| |||| || ||||| |||| Sbjct 309 AGCTGGGACCTGTGTTTTTATTAAACAGTCGGGCCCCCCTAGTCACTGCGACCTGCGGGT 368 Query 297 ---TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct 369 TACGCACCCGCAGGCACCCCTTCTCCCGAAGTTACGGGGCCAGTTTGCCGAGTTCC 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062378475776