Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq536 123 7e-26 >seq536 Length=1527 Score = 123 bits (136), Expect = 7e-26 Identities = 241/356 (68%), Gaps = 10/356 (3%) Strand=Plus/Minus Query 155 GACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAA 214 || ||| | ||||||| | ||||||||||| |||||| || |||||| | || Sbjct 1463 GAGAGGAGGTGCATGGCCGCCGTCAGCTCGTACCGTGAGGCGTCCACTTAAGTGTGGTAA 1404 Query 215 CGAGCGCAACCCTTAAGCTTAGTTGCCA-TCATTA---------AGTTGGGCACTCTAAG 264 |||||| |||| | |||||||| || | || |||||||| | Sbjct 1403 CGAGCGAGACCCGCGCCCCCAGTTGCCAGTCCCTCCCGCTCGGGAGGGAGGCACTCTGGG 1344 Query 265 TTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTA 324 ||||||||| || || ||||||||||| | || ||||| | ||| ||||||| | Sbjct 1343 GGGACTGCCGGCGATAAGCCGGAGGAAGGGGCGGGCGACGGTAGGTCAGTATGCCCCGAA 1284 Query 325 TGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTC 384 ||||||||| || |||||||||| | |||| ||| ||| ||| ||| Sbjct 1283 ACCCCCGGGCTACACGCGCGCTACAATGGGCGGGACAATGGGACCCGACCCCGAAAGGGG 1224 Query 385 AAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAA 444 ||| |||||| |||| | |||||||||||| | | |||||||||| | |||| Sbjct 1223 AAGGGAATCCCCTAAACCCGCCCTCAGTTCGGATCGCGGGCTGCAACTCGCCCGCGTGAA 1164 Query 445 GCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCC 500 ||||||||| |||||| || ||| ||| ||| |||||||| || ||||| Sbjct 1163 GCTGGAATCCCTAGTACCCGCGTGTCATCATCGCGCGGCGAATACGTCCCTGCTCC 1108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503969528960