Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1897 280 3e-73 >seq1897 Length=1228 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 1107 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 1048 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 1047 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 988 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 987 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 928 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 927 GTAATTATTCTGACACCTCT 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854382689856