Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1368 91.5 5e-16 >seq1368 Length=2263 Score = 91.5 bits (100), Expect = 5e-16 Identities = 80/96 (83%), Gaps = 4/96 (4%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||||| || |||||| |||| || ||||| ||||||| ||||||||||||||||| Sbjct 1695 GGTTTCAGGCTCT-TTTCACCCCCCTCCCGGGGTGCTTTTCAGCTTTCCCTCACGGTACT 1753 Query 530 TGTCCGCTATCGGTCACCAAGGA-GTATTTAGGCTT 564 || ||||||||||| | ||| ||||||||| || Sbjct 1754 AGTTCGCTATCGGTCTC--GGGACGTATTTAGGGTT 1787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817563175424