Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1368 100 7e-19 >seq1368 Length=2263 Score = 100 bits (110), Expect = 7e-19 Identities = 85/100 (85%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||||| ||| |||||| |||||| ||||||| |||||| ||||||||||||||| Sbjct 1694 CGGTTTCAGGCTCT-TTTCACCCCCCTC-CCGGGGTGCTTTTCAGCTTTCCCTCACGGTA 1751 Query 331 CTAGTTCACTATCGGTCAGTCAGTA-GTATTTAGCCTTGG 369 ||||||| ||||||||| || | | |||||||| |||| Sbjct 1752 CTAGTTCGCTATCGGTC--TCGGGACGTATTTAGGGTTGG 1789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241574845184