Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq536 100 6e-19 >seq536 Length=1527 Score = 100 bits (110), Expect = 6e-19 Identities = 122/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 17 GGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC-GTGT 75 |||||||| ||||| | | | | | ||||||| |||||||| | |||| || |||| Sbjct 487 GGTTTCCCGCATTGCGGAGGTTTCGCGCCTGCTGCGCCCCGTAGG-GCCTGGACCCGTGT 545 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCA-GTCCGGCTACCGATCGTCGGCTTGGTGG 134 |||||| | || | | || |||||| | || | |||||||| |||||||||||| Sbjct 546 CTCAGTGTCCATCTCCGGGCTCCCGCTCTCACGGCCCG-TACCGATCTTCGGCTTGGTGG 604 Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || ||| | |||||||||||||||||||||| ||||||| Sbjct 605 GCCGTTACCCCACCAACTACCTAATCGGCCGCCGGCCCATC 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998379772416