Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq536 77.0 1e-11 >seq536 Length=1527 Score = 77.0 bits (84), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 ||||| | || ||| | |||||| |||||||| ||||||||| |||||| ||| |||| Sbjct 647 AGGATGGGCCGGCGGCCGATTAGGTAGTTGGTGGGGTAACGGCCCACCAAGCCGAAGATC 588 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACAC-GGTCCAAACTCCT 268 ||| | | |||||| | || | | || | |||||||||| |||||| | ||| Sbjct 587 GGTACGGGCCGTGAGAGCGGGAGCCCGGAGATGGACACTGAGACACGGGTCCAGGC-CCT 529 Query 269 ACGGGAGGCAGCAG 282 ||||| ||||||| Sbjct 528 ACGGGGCGCAGCAG 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497569658624