Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1368 87.8 6e-15 >seq1368 Length=2263 Score = 87.8 bits (96), Expect = 6e-15 Identities = 134/183 (73%), Gaps = 10/183 (5%) Strand=Plus/Minus Query 303 GGGAGTGAGGGCATGGGTGCTAAGGTCCGTGC-CCGAGAGGAGAAGAATCCGGACTATCA 361 |||||| |||| |||| |||| |||| | |||||||| ||| || || ||| Sbjct 1173 GGGAGT-AGGGTGGCGGTG-TAAG--CCGTCCACCGAGAGGGGAACAACCCAGACCGGG- 1119 Query 362 GCTAAGGCCCCGAAATGACAGCTAAGTTAAACT---AACGAAGTCTGATTGCTAAGACAG 418 | ||||||||| || || | ||||||| ||| || | ||| || |||||| Sbjct 1118 GTTAAGGCCCCAAAGTGCCGGCTAAGTGTTACTCCAAAGGGTGTCCCGGGCCTTAGACAG 1059 Query 419 CTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCG 478 | ||| || ||||| ||||||||||| | |||||||||||||||||||||||| |||| Sbjct 1058 CGGGGAGGTAGGCTTAGAAGCAGCCATCC-TTTAAAGAGTGCGTAACAGCTCACCCGTCG 1000 Query 479 AGG 481 ||| Sbjct 999 AGG 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689565768704