Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1368 73.4 7e-11 >seq1368 Length=2263 Score = 73.4 bits (80), Expect = 7e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 162 GAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCA 221 |||||||| ||| |||||||||| |||| | ||||||||||||| ||| | ||| || Sbjct 2080 GAACGCGGGGAATTGAAACATCTTAGTACCCGCAGGAAAAGAAAGCAAAAGCGATGCCGT 2021 Query 222 AAGTAGTGGCGAGCGAAA 239 ||||| ||||| ||||| Sbjct 2020 GAGTAGGGGCGACCGAAA 2003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918381393216