Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq536 78.8 2e-12 >seq536 Length=1527 Score = 78.8 bits (86), Expect = 2e-12 Identities = 98/132 (74%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACC-GTGTCTCAGTTCCAATGTGGGGGACCTTCCTC 223 ||||||| |||||||| | |||||| |||||||||| | || | ||| | ||| Sbjct 515 CTGCTGCGCCCCGTAGG-GCCTGGACCCGTGTCTCAGTGTCCATCTCCGGGCTCCCGCTC 573 Query 224 TCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAA 283 ||| ||| || | ||| | |||| |||||||||||||||| || |||||||||| | Sbjct 574 TCACGGCCCGTACCGATCTTCGGCTTGGTGGGCCGTTACCCCACCAACTACCTAATCGGC 633 Query 284 CGCATCCCCATC 295 ||| |||||| Sbjct 634 CGCCGGCCCATC 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068778346112