Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1252 883 0.0
>seq1252
Length=1001
Score = 883 bits (978), Expect = 0.0
Identities = 596/658 (91%), Gaps = 12/658 (2%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 905
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 845
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 844 AGCACTTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCATGCAAC 785
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267
||||| |||| || | || || |||| | | | |||| ||||| | || | |||||
Sbjct 784 CAGACGTGCCGGC-GGTGTTCCCCCGGTCTTTTGACCGGGTCACTC-GCCGCCGGCAGGC 727
Query 268 CAGCATCAGCTCGGGCG-GTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326
||||| || ||||| |||||| |||||| | ||||||||||| |||| ||| |||
Sbjct 726 TCGCATC-GCCTGGGCGCGTCGGAGAAAGGCGCGGGGAATGTGGCTCCCT--CGGGAGTG 670
Query 327 TTATAGCCCGGGGTGGAATGCGGC-CCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
||||||||| | | | ||| |||| ||||| || | ||||||||||||||||||||||||
Sbjct 669 TTATAGCCCCGTGCGCAATACGGCGCCGCCCGGGC-GAGGTCCGCGCTCCGGCTAGGATG 611
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 610 CGGGCGTAATGGTTGTCTGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 551
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
||||||||| ||| ||||||||| | |||||||||||||||||||||||||||| |
Sbjct 550 GCGAGTGTTCGGGCGTCAAACCCTTACGCGTAATGAAAGTGAACGGAGGTGGGA----GC 495
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 TTCGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 435
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 375
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 374 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079963899650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |