Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1252 883 0.0 >seq1252 Length=1001 Score = 883 bits (978), Expect = 0.0 Identities = 596/658 (91%), Gaps = 12/658 (2%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 905 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 904 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 845 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 844 AGCACTTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCATGCAAC 785 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 ||||| |||| || | || || |||| | | | |||| ||||| | || | ||||| Sbjct 784 CAGACGTGCCGGC-GGTGTTCCCCCGGTCTTTTGACCGGGTCACTC-GCCGCCGGCAGGC 727 Query 268 CAGCATCAGCTCGGGCG-GTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 ||||| || ||||| |||||| |||||| | ||||||||||| |||| ||| ||| Sbjct 726 TCGCATC-GCCTGGGCGCGTCGGAGAAAGGCGCGGGGAATGTGGCTCCCT--CGGGAGTG 670 Query 327 TTATAGCCCGGGGTGGAATGCGGC-CCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 ||||||||| | | | ||| |||| ||||| || | |||||||||||||||||||||||| Sbjct 669 TTATAGCCCCGTGCGCAATACGGCGCCGCCCGGGC-GAGGTCCGCGCTCCGGCTAGGATG 611 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 610 CGGGCGTAATGGTTGTCTGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 551 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||||||| ||| ||||||||| | |||||||||||||||||||||||||||| | Sbjct 550 GCGAGTGTTCGGGCGTCAAACCCTTACGCGTAATGAAAGTGAACGGAGGTGGGA----GC 495 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 494 TTCGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 435 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 375 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 374 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079963899650