Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 262 3e-65
seq959 226 2e-54
>seq1295
Length=44835
Score = 262 bits (290), Expect = 3e-65
Identities = 641/963 (67%), Gaps = 10/963 (1%)
Strand=Plus/Plus
Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059
|||| | || || ||||| || ||||||||||| | ||| ||||| || || ||||| |
Sbjct 17071 TGGGTAAAGCCAGGGATGCAAGATTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCCA 17130
Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
||| || |||||||| || |||| ||||| || | || | || || || |
Sbjct 17131 TAATCTCAGTGCACAGGTTGGAAGAGCGAATGGTACCAAGGTTTTTCTGGTTGGATTTTC 17190
Query 66120 -GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178
| ||||| |||||||| || |||| | ||||| || ||||| ||| | ||| | |
Sbjct 17191 TGTTTGCA-GCATCCTTATAGCACATGAAGGGAGTACCTGTCTCCGTTTGAGCCTCGAGG 17249
Query 66179 ATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA-CGTACCGCCCTACCTTTGCGTTCGTA 66237
|| |||| ||| || | || ||| || || | | | ||| | |||||||||
Sbjct 17250 ATTGCGTACCATAGTTTCTGCGCACGCACAGTCTCGCGAC-CACGACCCTCGCGTTCGTA 17308
Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297
||||||||||| ||||| ||| || | || || | || | || || | |||
Sbjct 17309 TTGTTCGTAGAGAGCCTCGAACTTTTCCCCATACACATCAGCAAGGCCAGGGCATTCGTG 17368
Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357
|||||||||| | ||| | | ||| || || || ||| || | || || ||
Sbjct 17369 CGGACACATCAAAGTCCATGTGCTGTTCTGCTCCACCCGTTTCATGAACAAGTCTGGGAT 17428
Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417
||| || |||||||| || ||||| || || || || |||| || || |||||||
Sbjct 17429 CCAAAGCGCGTAGAAAAGGTCGCGAGCACGGACTTCTTCTTTGCCATGGTTCTTGCGCAG 17488
Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477
||||||||| || ||||| |||||||| || || || |||||||| || | ||
Sbjct 17489 GTCGAGGAAGGAGAATATGTCCGCATGCCACGGCTCAAGATAGATGGCAAAGGCACCGGG 17548
Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537
||| ||| ||||||||| ||||| || || || |||||| | ||||| | ||| ||
Sbjct 17549 ACGCTTGTTGCCACCTTGATCGACATACCGCGCAGTGTTGTTGTATACACGAAGCATAGG 17608
Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597
||| | ||||| || | ||||| ||||| | || || ||| ||| || ||
Sbjct 17609 TACCAATCCGTTTGAAGTTCCATTTGTGCCACCAATATACGACCCTGTTGCGCGAATGCG 17668
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGGCCAC 66654
||| ||||| ||||| |||||||| || |||| ||| ||||| ||| | |
Sbjct 17669 GTGTACATTGAGACCTATACCACCAGCATTCTTTGAGATCATGGC-GCATGTTTTCAGAG 17727
Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714
|||| | ||||| || || ||| |||| ||| | | | | |||||| |
Sbjct 17728 TGTC--ATAAATGCCCTCGATACTGTCCTCCTTCATGTCAATCAAGAAACATGAAGCCAA 17785
Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774
||||| |||||| ||||| ||| ||||| |||| ||| || || ||||| | |
Sbjct 17786 TTGGGCGGATGGTGTGCCGGCCATGAACAGGGTTGGTGAAGCATGAGTGAAGTACTTGTT 17845
Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC 66834
|||||| ||||| |||||||| |||| || |||| |||||| || || || | ||
Sbjct 17846 CGACATGAGGTTGTAGGTCTCGATTGCAGCCTCGATGTCTTCGCCGTGTATACCCACCGC 17905
Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTA 66894
| ||||| | | || ||| || | || | | | | || || | ||
Sbjct 17906 AACACGCATGATCATGTGTTGCGGTCTCTCTGCAATTTTCCCGTCAATTCTCAGGAGATA 17965
Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGAT 66954
|||||||| || ||||||| ||||| || |||||||| || | ||| ||||||
Sbjct 17966 TGAGCGTTCAAGAGTCTTGAAGCCAAAATATTGATAATTGAAGTCCCGATCATACACGAT 18025
Query 66955 GGC 66957
|||
Sbjct 18026 GGC 18028
Score = 114 bits (126), Expect = 1e-20
Identities = 330/503 (66%), Gaps = 6/503 (1%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||| ||||||| | |||||| | || | || ||||||||||| ||
Sbjct 16167 TCAACAGTGAATTGGATCGGTGCCGAGGCCGCCATTGTACGGAGGTAGTACATGCCAGTT 16226
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
|||||||| |||| | ||||||||| | || | || || | | | || ||
Sbjct 16227 TTGAGGCCCAATTTCCAACCGGTGAAATGCAT-GCTGGTGATCTTACCCATGGTGGGTTC 16285
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || ||||| | ||| ||| || |||||| | || || || ||||||||
Sbjct 16286 TTTCATGTGAATATTTAGCGAATGAGATTGGTCGATGAATGCGCCGCGGTCAGCAGCCAT 16345
Query 65257 GTCAATGATACGACGTCCCGAT--ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314
| | ||| |||| | || || ||||| || |||||||| ||| | |||
Sbjct 16346 CTGCACAATATGACG--CTGACTGATTTCCCATACAGTCTTGTAAAGGGCTTTGAGGTCA 16403
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|||||| | | ||| ||| || || || | | |||||| ||||| || |||
Sbjct 16404 TCTGGAATGTTCGGGATGCGCTGAACAGACCCGCCATCTGCAATGATGCGGTTCTTCATG 16463
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434
|||||||| | ||| ||||| ||| | | | ||| | |||| || |||
Sbjct 16464 TTGTCTGACCAGAGACCGCGATCGACAAGGTCCTTTAGCAACCATGGGTTGACCACCTGG 16523
Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494
|||||||| | || |||||||| || ||||| || ||| || || || |||||
Sbjct 16524 AACTCGCCAGCTAGAACACGACGACTGTAAATGTTCGAAGTGTACGGCTCGAAACATTCA 16583
Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554
|| ||| | || || | ||| || || ||||||||||| || |||| |||||||||
Sbjct 16584 TTGAAGCCCATGATCTGCGAAGTCGACGCTGTTGGCATGGGCGCCACCAGCAATGAGTTG 16643
Query 65555 CGCAATCCGTTCATTTCAATGTT 65577
|| | ||||| | | |||| ||
Sbjct 16644 CGGACTCCGTGCTGTGCAATCTT 16666
>seq959
Length=28360
Score = 226 bits (250), Expect = 2e-54
Identities = 575/860 (67%), Gaps = 30/860 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||||||||| ||||||||||||| |||||| ||||| |
Sbjct 15621 ATATGGCAAATGTACAAGAAGGCGGAAGCCTCCTTCTGGACGGCCGAGGAGATCGATCTT 15680
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
|| ||||| || |||||||| | ||| | || | ||| | | |||| | |
Sbjct 15681 TCAAAAGATTTGCATGACTGGAACAAGCGCCT---GAATGATGACGAGCGTTTCTTCATC 15737
Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
||||| | || || ||||| || || ||||| || ||||| ||||| | | ||
Sbjct 15738 TCTCATGTCCTCGCCTTTTTTGCGGCATCAGACGGGATTGTCAACGAGAACCTCGTCGAG 15797
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
|| ||| | ||||||||| | | || || || || |||||||||||||||||
Sbjct 15798 CGATTCTCAGCCGAGGTGCAAATACCCGAAGCACGCTGCTTCTACGGCTTCCAGATCATG 15857
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
||||||||| ||||||| |||| ||| | | |||||||| || |||||||| || | |
Sbjct 15858 ATGGAGAATATCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATCAGCGAACCG 15917
Query 61381 GCGGAACGTGAACG-AT-TGTTCAATGCCATCGAGACGATAC----CGGCGGTGAAGCGG 61434
||| | ||| || | ||||| |||||||| | || | | |||| | |
Sbjct 15918 AAACAAC--GCACGTATCTATTCAACGCCATCGACAACATCCCATGCATCGGTAA----G 15971
Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493
|| ||||||||||| || | | ||||| | | || | | || || || || |
Sbjct 15972 AAGGCGGATTGGGCGCTGCGA-TGGATTAGCGATAAGAATTCGACGTTCGGCTGTCGTCT 16030
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || || || | || ||||| | || ||| | | || || || | || || ||
Sbjct 16031 CGTTGCTTTCGCCGCTGTAGAGGGCATTTTCTTCTCTAGCTCCTTCGCATCCATTTTCTG 16090
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| | || || ||||| || ||||||||||||||||| ||| ||| | || || || ||
Sbjct 16091 GCTCAAAAAGCGTGGTCTCATGCCCGGTCTGACCTTTTCCAACGAGCTTATTTCCCGTGA 16150
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673
||||||||||| || || || | |||| || | | || | | | ||
Sbjct 16151 TGAGGGCATGCACACAGACTTCGCCTGTCTGCTCTTTTCCCACCTTC--GCAACAAGCCC 16208
Query 61674 G-TCGGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731
| ||| ||||| ||| | ||| || | ||| || || || || ||| |||| ||
Sbjct 16209 GATCG--GGAGCTGGTGAG-GAGCATCATCACTGAAGCCGTCACCATTGAAAAGGAGTTC 16265
Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
|||| ||| | ||||| ||| |||| | |||||||| | || |||| || ||
Sbjct 16266 GTGACAGACTCATTGCCTGTCGCACTACTAGGCATGAACTCCAACCTCATGTGCCAATAC 16325
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|| || ||||| ||||| || || || ||| | || | | || || || |
Sbjct 16326 ATCGAGTTTGTGGCCGATCGCCTACTGCTCGCGCTCGGCAACAGCAGGTATTACAACGCC 16385
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||||||||| |||||||| | || ||| ||| |||||||| ||||| || |||
Sbjct 16386 ACCAACCCATTTGACTTCATGGAGAACATCTCGTTGGCGGGCAAGACCAATTTCTTTGAG 16445
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| | || || || |||||
Sbjct 16446 AAGAGAGTCGGTGATTATCA 16465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397559845259120
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