Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq4 104 1e-16 seq1 84.2 9e-11 >seq4 Length=4519820 Score = 104 bits (114), Expect = 1e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 349081 AATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTG 349140 |||||||||||||| |||| || ||||| || ||||||| || || || |||||||| Sbjct 2362094 AATCTCCTTGAGTCGCGGCACACCGAGGGTGACATTCTTGGACGAAACACCAGCAAAGTG 2362035 Query 349141 GAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCC 349200 |||||| | || |||| ||| ||| |||||| || ||| |||| | || | || ||| Sbjct 2362034 GAAGGTGTTCAGCGTCATCTGAGTGGCGGGCTCACCAATGGACTGTGCTGCCAAGACGCC 2361975 Query 349201 TACCATCTCGCCGGG 349215 ||||||||||| || Sbjct 2361974 AACCATCTCGCCAGG 2361960 Score = 96.9 bits (106), Expect = 1e-14 Identities = 125/172 (73%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 |||| || ||||| |||||||||||||||||| |||||| ||| |||||| | || | Sbjct 2360238 TCTCATCACCGTCGAAGTCGGCGTTGTAGGGCGAGGTGACGGACAGGTTGAGTCTGAACG 2360179 Query 351162 TGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGG 351221 || || ||| || | ||||| || |||| |||||| | ||||| |||| | Sbjct 2360178 TGGAG---TACGGCATGACACGGACGCGATGGCCCATCATGGACTCCTTGTGCAGCGAAG 2360122 Query 351222 GCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTT 351273 |||| || ||| ||||||| ||| || || |||||||| ||| ||||| Sbjct 2360121 GCTGACGGTTGAAGATGATGTAGTCACCGTCCATCAAGTGCCGCTCGACCTT 2360070 >seq1 Length=5152962 Score = 84.2 bits (92), Expect = 9e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 21708 GGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAG 21767 ||||| |||||| || ||||| || ||||| ||||| ||||| | || ||| | || Sbjct 3112662 GGGGTGACGATGCGCTCGAGGATAAGCTGGGCAATGCGGTCGCCCTCCTGGATGGCGTAG 3112603 Query 21768 TCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACG 21827 || || | |||||||||||||| ||| || | ||| | || ||||| | Sbjct 3112602 TCGGTTTCGGCGTGGTTGAAGAGCAGGACCTTGAGCGGGCCGCGGTAGTCGGCGTCGATG 3112543 Query 21828 ACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGG 21887 || || || ||| ||||| |||||| |||| || ||||| | ||| ||||||||| Sbjct 3112542 ACGCCAGCACCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCCGAACGGGGCGCGACGCGG 3112483 Query 21888 CCGT 21891 |||| Sbjct 3112482 CCGT 3112479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737394094668