Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq18 188 4e-46
seq17 188 4e-46
seq16 188 4e-46
seq15 188 4e-46
seq14 188 4e-46
seq13 188 4e-46
seq11 188 4e-46
seq9 188 4e-46
seq8 188 4e-46
seq7 188 4e-46
seq25 178 7e-43
>seq18
Length=12140
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 3759 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 3818
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3819 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3875
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 11624 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 11683
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11684 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 11740
>seq17
Length=12219
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 2172 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2113
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2112 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2056
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 10034 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9975
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9974 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9918
>seq16
Length=12719
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 1476 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1417
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1416 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1360
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 9334 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9275
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9274 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9218
>seq15
Length=12913
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 5706 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 5765
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5766 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5822
>seq14
Length=13034
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 1507 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1448
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1391
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 9369 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9310
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9309 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9253
>seq13
Length=13249
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 2590 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2649
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2650 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2706
Score = 183 bits (202), Expect = 2e-44
Identities = 109/114 (96%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63
|||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||
Sbjct 10406 CCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCCGAT 10465
Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10466 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10519
>seq11
Length=14332
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 1395 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1454
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1511
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 9260 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9319
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9320 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9376
>seq9
Length=16668
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 6359 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 6418
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6419 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6475
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 14222 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 14281
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14282 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 14338
>seq8
Length=18717
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 2686 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2627
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2626 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2570
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 10544 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 10485
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10484 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10428
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 18393 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 18334
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18333 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 18277
>seq7
Length=19581
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 1526 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1467
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1410
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 9385 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9326
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9325 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9269
Score = 188 bits (208), Expect = 4e-46
Identities = 112/117 (96%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 17247 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 17188
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17187 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 17131
>seq25
Length=2555362
Score = 178 bits (196), Expect = 7e-43
Identities = 111/117 (95%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||| |||||||||||||||||||||||||||| || | ||||||||||
Sbjct 6868 GAACCCAAA-ACTT-GATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 6811
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6810 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399929530
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