Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq18 188 4e-46 seq17 188 4e-46 seq16 188 4e-46 seq15 188 4e-46 seq14 188 4e-46 seq13 188 4e-46 seq11 188 4e-46 seq9 188 4e-46 seq8 188 4e-46 seq7 188 4e-46 seq25 178 7e-43 >seq18 Length=12140 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 3759 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 3818 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3819 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3875 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 11624 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 11683 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11684 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 11740 >seq17 Length=12219 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 2172 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2113 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2112 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2056 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 10034 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9975 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9974 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9918 >seq16 Length=12719 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 1476 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1417 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1416 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1360 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 9334 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9275 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9274 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9218 >seq15 Length=12913 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 5706 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 5765 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5766 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5822 >seq14 Length=13034 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 1507 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1448 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1447 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1391 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 9369 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9310 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9309 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9253 >seq13 Length=13249 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 2590 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2649 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2650 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2706 Score = 183 bits (202), Expect = 2e-44 Identities = 109/114 (96%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63 |||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||| Sbjct 10406 CCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCCGAT 10465 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10466 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10519 >seq11 Length=14332 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 1395 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1454 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1455 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1511 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 9260 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9319 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9320 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9376 >seq9 Length=16668 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 6359 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 6418 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6419 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6475 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 14222 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 14281 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14282 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 14338 >seq8 Length=18717 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 2686 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 2627 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2626 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2570 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 10544 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 10485 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10484 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10428 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 18393 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 18334 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18333 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 18277 >seq7 Length=19581 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 1526 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 1467 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1466 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1410 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 9385 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 9326 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9325 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 9269 Score = 188 bits (208), Expect = 4e-46 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 17247 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 17188 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17187 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 17131 >seq25 Length=2555362 Score = 178 bits (196), Expect = 7e-43 Identities = 111/117 (95%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||| |||||||||||||||||||||||||||| || | |||||||||| Sbjct 6868 GAACCCAAA-ACTT-GATTTCTCGTAAGGTGCCGAGCGAGTCAGAAAAAGAACATCGCCC 6811 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6810 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399929530