Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq25 91.5 9e-17
seq18 91.5 9e-17
seq17 91.5 9e-17
seq16 91.5 9e-17
seq15 91.5 9e-17
seq14 91.5 9e-17
seq13 91.5 9e-17
seq11 91.5 9e-17
seq9 91.5 9e-17
seq8 91.5 9e-17
seq7 91.5 9e-17
>seq25
Length=2555362
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 7441 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7385
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 7384 GTCAGGGACGTAAT-CAACGCATGCT 7360
>seq18
Length=12140
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3182 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3238
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 3239 GTCAGGGACGTAAT-CAACGCATGCT 3263
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 11047 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 11103
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 11104 GTCAGGGACGTAAT-CAACGCATGCT 11128
>seq17
Length=12219
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2749 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2693
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 2692 GTCAGGGACGTAAT-CAACGCATGCT 2668
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 10611 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 10555
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 10554 GTCAGGGACGTAAT-CAACGCATGCT 10530
>seq16
Length=12719
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2053 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1997
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 1996 GTCAGGGACGTAAT-CAACGCATGCT 1972
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 9911 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9855
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 9854 GTCAGGGACGTAAT-CAACGCATGCT 9830
>seq15
Length=12913
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 5129 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5185
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 5186 GTCAGGGACGTAAT-CAACGCATGCT 5210
>seq14
Length=13034
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2084 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2028
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 2027 GTCAGGGACGTAAT-CAACGCATGCT 2003
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 9946 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9890
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 9889 GTCAGGGACGTAAT-CAACGCATGCT 9865
>seq13
Length=13249
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2015 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2071
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 2072 GTCAGGGACGTAAT-CAACGCATGCT 2096
Score = 87.8 bits (96), Expect = 1e-15
Identities = 75/86 (87%), Gaps = 5/86 (6%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| |||||||||||| |||||||||
Sbjct 9827 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGG-TGTACAAAG 9882
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 9883 GTCAGGGACGTAAT-CAACGCATGCT 9907
>seq11
Length=14332
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 818 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 874
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 875 GTCAGGGACGTAAT-CAACGCATGCT 899
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 8683 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 8739
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 8740 GTCAGGGACGTAAT-CAACGCATGCT 8764
>seq9
Length=16668
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 5783 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5839
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 5840 GTCAGGGACGTAAT-CAACGCATGCT 5864
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 13645 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 13701
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 13702 GTCAGGGACGTAAT-CAACGCATGCT 13726
>seq8
Length=18717
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3263 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3207
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 3206 GTCAGGGACGTAAT-CAACGCATGCT 3182
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 11119 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 11063
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 11062 GTCAGGGACGTAAT-CAACGCATGCT 11038
>seq7
Length=19581
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2103 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2047
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 2046 GTCAGGGACGTAAT-CAACGCATGCT 2022
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 9962 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9906
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 9905 GTCAGGGACGTAAT-CAACGCATGCT 9881
Score = 86.0 bits (94), Expect = 4e-15
Identities = 73/86 (85%), Gaps = 3/86 (3%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 17825 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17769
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| | |||| |||
Sbjct 17768 GTCAGGGACGTAATCAACCGCATGCT 17743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799923860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |