Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 9e-17 seq18 91.5 9e-17 seq17 91.5 9e-17 seq16 91.5 9e-17 seq15 91.5 9e-17 seq14 91.5 9e-17 seq13 91.5 9e-17 seq11 91.5 9e-17 seq9 91.5 9e-17 seq8 91.5 9e-17 seq7 91.5 9e-17 >seq25 Length=2555362 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 7441 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7385 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 7384 GTCAGGGACGTAAT-CAACGCATGCT 7360 >seq18 Length=12140 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3182 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3238 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 3239 GTCAGGGACGTAAT-CAACGCATGCT 3263 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 11047 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 11103 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 11104 GTCAGGGACGTAAT-CAACGCATGCT 11128 >seq17 Length=12219 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2749 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2693 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 2692 GTCAGGGACGTAAT-CAACGCATGCT 2668 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 10611 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 10555 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 10554 GTCAGGGACGTAAT-CAACGCATGCT 10530 >seq16 Length=12719 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2053 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1997 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 1996 GTCAGGGACGTAAT-CAACGCATGCT 1972 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 9911 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9855 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 9854 GTCAGGGACGTAAT-CAACGCATGCT 9830 >seq15 Length=12913 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 5129 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5185 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 5186 GTCAGGGACGTAAT-CAACGCATGCT 5210 >seq14 Length=13034 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2084 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2028 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 2027 GTCAGGGACGTAAT-CAACGCATGCT 2003 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 9946 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9890 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 9889 GTCAGGGACGTAAT-CAACGCATGCT 9865 >seq13 Length=13249 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2015 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2071 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 2072 GTCAGGGACGTAAT-CAACGCATGCT 2096 Score = 87.8 bits (96), Expect = 1e-15 Identities = 75/86 (87%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| |||||||||||| ||||||||| Sbjct 9827 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGG-TGTACAAAG 9882 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 9883 GTCAGGGACGTAAT-CAACGCATGCT 9907 >seq11 Length=14332 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 818 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 874 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 875 GTCAGGGACGTAAT-CAACGCATGCT 899 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 8683 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 8739 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 8740 GTCAGGGACGTAAT-CAACGCATGCT 8764 >seq9 Length=16668 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 5783 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5839 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 5840 GTCAGGGACGTAAT-CAACGCATGCT 5864 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 13645 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 13701 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 13702 GTCAGGGACGTAAT-CAACGCATGCT 13726 >seq8 Length=18717 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3263 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3207 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 3206 GTCAGGGACGTAAT-CAACGCATGCT 3182 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 11119 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 11063 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 11062 GTCAGGGACGTAAT-CAACGCATGCT 11038 >seq7 Length=19581 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2103 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2047 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 2046 GTCAGGGACGTAAT-CAACGCATGCT 2022 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 9962 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9906 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 9905 GTCAGGGACGTAAT-CAACGCATGCT 9881 Score = 86.0 bits (94), Expect = 4e-15 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 17825 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17769 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| | |||| ||| Sbjct 17768 GTCAGGGACGTAATCAACCGCATGCT 17743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799923860