Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq13 172 7e-41
seq18 170 2e-40
seq17 170 2e-40
seq16 170 2e-40
seq15 170 2e-40
seq14 170 2e-40
seq11 170 2e-40
seq9 170 2e-40
seq8 170 2e-40
seq7 170 2e-40
seq25 154 2e-35
>seq13
Length=13249
Score = 172 bits (190), Expect = 7e-41
Identities = 175/220 (80%), Gaps = 10/220 (5%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 10658 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 10717
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 10718 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 10777
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGG--GCTGGGTAATGCAGT 176
| |||| ||| |||| ||||| || || || ||| ||| || || | | |||
Sbjct 10778 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCGCCGG---ACG-AGT 10832
Query 177 ACTCGCCGTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216
| ||| |||||||||||| || |||| || ||||||
Sbjct 10833 GCACGCGGTGAGGCGGACC-CGCCAGCCAGGCCAAGTTTC 10871
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 2845 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 2904
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 2905 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 2964
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 2965 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 3023
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 3024 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 3061
>seq18
Length=12140
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 4015 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 4074
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 4075 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 4134
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 4135 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 4193
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 4194 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 4231
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 11880 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 11939
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 11940 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 11999
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 12000 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 12058
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 12059 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 12096
>seq17
Length=12219
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 1916 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 1857
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 1856 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1797
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1796 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1738
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1737 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1700
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 9778 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 9719
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 9718 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 9659
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 9658 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 9600
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 9599 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 9562
>seq16
Length=12719
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 1220 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 1161
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 1160 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1101
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1100 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1042
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1041 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1004
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 9078 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 9019
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 9018 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 8959
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 8958 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 8900
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 8899 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 8862
>seq15
Length=12913
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 5962 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 6021
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 6022 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 6081
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 6082 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 6140
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 6141 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 6178
>seq14
Length=13034
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 1251 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 1192
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 1191 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1132
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1131 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1073
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1072 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1035
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 9113 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 9054
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 9053 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 8994
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 8993 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 8935
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 8934 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 8897
>seq11
Length=14332
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 1651 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 1710
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 1711 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1770
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1771 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1829
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1830 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1867
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 9516 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 9575
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 9576 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 9635
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 9636 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 9694
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 9695 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 9732
>seq9
Length=16668
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 6615 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 6674
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 6675 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 6734
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 6735 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 6793
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 6794 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 6831
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 14478 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 14537
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 14538 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 14597
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 14598 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 14656
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 14657 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 14694
>seq8
Length=18717
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 2430 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 2371
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 2370 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 2311
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 2310 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 2252
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 2251 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 2214
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 18137 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 18078
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 18077 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 18018
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 18017 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 17959
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 17958 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 17921
Score = 168 bits (186), Expect = 8e-40
Identities = 121/138 (88%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 10289 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 10230
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 10229 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 10170
Query 121 CCGCAC-ACCAATGAAGG 137
| |||| ||| ||||||
Sbjct 10169 CAGCACGCCCAGTGAAGG 10152
>seq7
Length=19581
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 1270 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 1211
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 1210 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1151
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1150 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1092
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1091 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1054
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 9129 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 9070
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 9069 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 9010
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 9009 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 8951
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 8950 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 8913
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 16991 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 16932
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 16931 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 16872
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 16871 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 16813
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 16812 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 16775
>seq25
Length=2555362
Score = 154 bits (170), Expect = 2e-35
Identities = 172/219 (79%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 6617 CGTCTCTAGAAACCAACAAAATAGA-ACGCACGCCCTATTTTATTATTCCATGCTAACGT 6559
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||| ||||||||||||||||| |||| |||||||||||| ||||
Sbjct 6558 ATTCGAGCAAAGGCCTGC-TTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCC- 6501
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 6500 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 6442
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 6441 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 6404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199844318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |