Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq21 464 5e-126 >seq21 Length=3333843 Score = 464 bits (514), Expect = 5e-126 Identities = 1248/1884 (66%), Gaps = 62/1884 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| || || | | | || ||| |||| | |||||||||||||| ||| Sbjct 606536 TCGACAGTGAATTGAATGGGAGCCGAGGCAGCCATGGTACGGAGATAGTACATGCCAGTC 606595 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || ||||| ||| || || ||||| || | | || |||| | | | ||||| Sbjct 606596 TTCAGACCAGCCTTCCAGCCAGCAAAGTGCATAGAAG-TGATCTTGCCCATAGTAGGCTC 606654 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||||||| ||| || ||| || |||||| || || ||||| Sbjct 606655 CTTCATGTGGATGTTTAGCGACTGAGACTGGTCAATGAAAGCACCACGGTCAGCGGCCAT 606714 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG--CGACGTA-CCTC 65313 |||||||| | || ||| |||||||||||||||||||| || | || |||| Sbjct 606715 CTCAATGATCCTTCGCTGCGAGATCTCCCAGACGGTCTTGTAAAGAGTCTTTGTCTCCTC 606774 Query 65314 AATTGGAATCTCCTCAATGTCCTGG--ACTGAACCACGACGTGCAATAATGCGATTACGC 65371 | || || | ||| ||||| | ||||| | | || || || || || | Sbjct 606775 A---GGGATGTTGGGAAT--CCTGGCAATAGAACCTCCATCGGCGATGATACGGTTCTTC 606829 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGAT 65427 || ||| ||||||| ||||| |||| ||| | |||| |||| | | |||| Sbjct 606830 ATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCATGGG----TTGAC 606885 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487 || |||||||| || | || ||||| ||| |||||||||||| ||| || || || Sbjct 606886 AACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCGAA 606945 Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | | || ||||||| ||||| || | ||| || |||||||||||||| || | | || Sbjct 606946 GCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGCAG 607005 Query 65548 TGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACA--T 65604 ||||| || | |||| | |||| || | || | || |||||| ||| | | Sbjct 607006 CGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACG-CCCAGTCCCAGAGGT 607064 Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG---- 65660 | || | || ||||| | |||||||| | || ||| | || |||| Sbjct 607065 CAGTAGGT-GT-GACATTC------CACATATCGTACTGGAGGATACC----CTGGGATA 607112 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || || || | | | | ||| || ||||| || | | || || Sbjct 607113 CGGGAGATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAG 607172 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 ||| || ||| || ||||||||||| || | || || | || || || Sbjct 607173 TGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTG 607232 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 |||| | || | | | || || | ||||| ||||||||||| || ||||||| Sbjct 607233 ACTCGAAAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGA 607292 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 |||| || || || || ||| || | ||||| |||||||||| |||| |||| Sbjct 607293 TGGGTCGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGA 607352 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCA 65959 | || ||||| ||||| || || || || || | ||| | || || ||| ||| Sbjct 607353 TGATCTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTT-GAAGTCA 607411 Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 || ||| ||| || | | ||||| || ||||||||||| || Sbjct 607412 AAC--------ACGC-CGGCCTTGTAGT---CGACAAAAGAAGGCAGGGCAAGAGAAGCC 607459 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | |||||| ||||| | ||| ||||||||||| ||||| ||||| || |||||||| || Sbjct 607460 AAGTTGCAAACAGCGACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTG 607519 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || ||| ||||| || | |||| || || |||||||| ||||| || |||||||| Sbjct 607520 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAG 607579 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 | ||| | || | || ||||| || | ||||| |||||||| |||||| || Sbjct 607580 AGCATAAAGGGGTTACCAGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGT 607639 Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAA 66258 || || || | | |||| | ||| || |||| ||||| || |||||| Sbjct 607640 GCGCGAACAGT-CTCGCGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAA 607698 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 |||||| | || |||| || | || |||| || || |||||||| | ||| | Sbjct 607699 TTCTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTT 607758 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 || | | || ||||| ||| || || ||||| ||||| || |||||||||||||| Sbjct 607759 GCCGTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATC 607818 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 ||| || || |||||| ||||||| || ||||||| ||| ||||| |||||| ||| Sbjct 607819 GCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTC 607878 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 || |||||||| || |||||||||||||| | || ||| ||| |||||| ||||| Sbjct 607879 AGCGTGCCATGGCTCTAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTC 607938 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 ||| |||||||| |||||| | ||||| | ||| || | ||| ||||||||| | || Sbjct 607939 GACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCC 607998 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 || ||||| ||||| || || || || || ||| || || || |||||||| Sbjct 607999 GTTAGTGCCACCGATGTATGAGCCAGTAGCACGAATGCGGTGCACGTTGAGGCCAATACC 608058 Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAAT 66675 || || ||||| ||||| ||||| || | | ||| | | |||||||| || Sbjct 608059 GCCAGCGGTCTTGGAGATCAACGCACA---GGTCTTGAGTGTGTCGTAAATGCCGTCGAT 608115 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 ||| |||| ||| | |||| ||||||| | ||| ||| |||||| | || Sbjct 608116 ACTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGC 608175 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795 ||| | || || | ||||| || ||||| | |||||||||| | ||| ||||| Sbjct 608176 GTTGAACAACGTCGGCGAGGCGTGTGTGAAGTACTTTTGAGACATGTAGTCGTAGGTCTC 608235 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855 |||| | || |||| || || ||||| || | ||| ||||| || | || ||| Sbjct 608236 GATGGCTTTCTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTG 608295 Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915 || || ||| | | | | || || | | | || ||||| || || ||||||| Sbjct 608296 TGGGCGCTCGGCGACCTTGCCGTTTATGCGGAGGAGATATGAGCGCTCAAGTGTCTTGAA 608355 Query 66916 ACCAAAGTACGAGTAATTGAAATC 66939 ||||||| || ||| ||||| || Sbjct 608356 ACCAAAGAACTGGTAGTTGAAGTC 608379 Score = 158 bits (174), Expect = 1e-33 Identities = 561/857 (65%), Gaps = 30/857 (4%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| || ||||| |||||||| | |||||| |||| | ||| Sbjct 2204185 TGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCAGAGGAGATCGACCTCTCC 2204126 Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205 || ||| | | |||||| | |||| | | ||| | || | ||||| || Sbjct 2204125 AAGGACCTTCACGACTGGAACAAGCGTCTCAACGAT-GACGAGCGCTTCTTCATCTCCCA 2204067 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 || | || ||||| || || || || || || ||||| ||||| | | || || || Sbjct 2204066 CGTCCTCGCCTTCTTCGCAGCCTCCGATGGCATTGTCAACGAGAACCTTGTTGAGCGATT 2204007 Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 | | || || ||| | | ||||| || || |||||||| ||||| || ||||| Sbjct 2204006 CTCTAGCGAAGTACAAATCCCCGAGGCACGATGCTTCTACGGTTTCCAAATCATGATGGA 2203947 Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA 61385 ||| || ||||| |||| ||| | | |||||||| || ||||| || |||| | | Sbjct 2203946 GAACGTTCACTCAGAGACCTACTCTCTGCTCATCGACACATACATTAGCGAGCCCAAGCA 2203887 Query 61386 ACGT--GAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGCG 61440 || | || | ||||| |||||||| | || || | | | || ||| || Sbjct 2203886 GCGCAGGTACC--TCTTCAACGCCATCGACAACATCCC--CTGC-ATCCGCAAGAAGGCC 2203832 Query 61441 GATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499 || |||||| | |||||| || | | ||| | ||||| | | || | | || Sbjct 2203831 GACTGGGCCCTGCGATGGATCTCCGACAAGAACTCC-ACATTCGCCAACCGCCTCGTTGC 2203773 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||| || | || |||||| | || ||||| || || || ||| | ||||| ||| | || Sbjct 2203772 ATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAA 2203713 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| || || || ||||||||||| || ||| ||| ||| | || || || |||||||| Sbjct 2203712 GAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGG 2203653 Query 61620 CATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCG 61677 |||||| || || | ||| || || ||| | || || | ||| | || | Sbjct 2203652 CATGCACACCGACTTCGCCTGCCTT-CTCTTC--TCTCT-CCTCGAGAACAAGCCCAGCC 2203597 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 | ||| ||| | | || | ||| || || || || ||||| || ||| Sbjct 2203596 CA-GAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGC 2203538 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| | || | | || |||||||||| | || |||| || || || || Sbjct 2203537 GACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAG 2203478 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTA---TGAAGCGGATCTATAATACGAAA 61854 || || || ||||||||| || | | | || | | || | |||| | | | Sbjct 2203477 TTCGTCGCTGACCGTCTGCTGTTGGCCCTCGGCAACGTCAA---GGTCTACCACGCCACC 2203421 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | ||||| |||| ||| ||||| || || |||||||| Sbjct 2203420 AACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAG 2203361 Query 61915 CGTGTAGGCGACTATCA 61931 || || |||||||| || Sbjct 2203360 CGCGTCGGCGACTACCA 2203344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567869175280