Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq21 464 5e-126
>seq21
Length=3333843
Score = 464 bits (514), Expect = 5e-126
Identities = 1248/1884 (66%), Gaps = 62/1884 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||| || || | | | || ||| |||| | |||||||||||||| |||
Sbjct 606536 TCGACAGTGAATTGAATGGGAGCCGAGGCAGCCATGGTACGGAGATAGTACATGCCAGTC 606595
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196
|| || ||||| ||| || || ||||| || | | || |||| | | | |||||
Sbjct 606596 TTCAGACCAGCCTTCCAGCCAGCAAAGTGCATAGAAG-TGATCTTGCCCATAGTAGGCTC 606654
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||||||| ||| || ||| || |||||| || || |||||
Sbjct 606655 CTTCATGTGGATGTTTAGCGACTGAGACTGGTCAATGAAAGCACCACGGTCAGCGGCCAT 606714
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG--CGACGTA-CCTC 65313
|||||||| | || ||| |||||||||||||||||||| || | || ||||
Sbjct 606715 CTCAATGATCCTTCGCTGCGAGATCTCCCAGACGGTCTTGTAAAGAGTCTTTGTCTCCTC 606774
Query 65314 AATTGGAATCTCCTCAATGTCCTGG--ACTGAACCACGACGTGCAATAATGCGATTACGC 65371
| || || | ||| ||||| | ||||| | | || || || || || |
Sbjct 606775 A---GGGATGTTGGGAAT--CCTGGCAATAGAACCTCCATCGGCGATGATACGGTTCTTC 606829
Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGAT 65427
|| ||| ||||||| ||||| |||| ||| | |||| |||| | | ||||
Sbjct 606830 ATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCATGGG----TTGAC 606885
Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487
|| |||||||| || | || ||||| ||| |||||||||||| ||| || || ||
Sbjct 606886 AACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCGAA 606945
Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547
| | || ||||||| ||||| || | ||| || |||||||||||||| || | | ||
Sbjct 606946 GCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGCAG 607005
Query 65548 TGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACA--T 65604
||||| || | |||| | |||| || | || | || |||||| ||| | |
Sbjct 607006 CGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACG-CCCAGTCCCAGAGGT 607064
Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG---- 65660
| || | || ||||| | |||||||| | || ||| | || ||||
Sbjct 607065 CAGTAGGT-GT-GACATTC------CACATATCGTACTGGAGGATACC----CTGGGATA 607112
Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720
| || || || | | | | ||| || ||||| || | | || ||
Sbjct 607113 CGGGAGATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAG 607172
Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780
||| || ||| || ||||||||||| || | || || | || || ||
Sbjct 607173 TGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTG 607232
Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|||| | || | | | || || | ||||| ||||||||||| || |||||||
Sbjct 607233 ACTCGAAAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGA 607292
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || || || ||| || | ||||| |||||||||| |||| ||||
Sbjct 607293 TGGGTCGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGA 607352
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCA 65959
| || ||||| ||||| || || || || || | ||| | || || ||| |||
Sbjct 607353 TGATCTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTT-GAAGTCA 607411
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
|| ||| ||| || | | ||||| || ||||||||||| ||
Sbjct 607412 AAC--------ACGC-CGGCCTTGTAGT---CGACAAAAGAAGGCAGGGCAAGAGAAGCC 607459
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
| |||||| ||||| | ||| ||||||||||| ||||| ||||| || |||||||| ||
Sbjct 607460 AAGTTGCAAACAGCGACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTG 607519
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| ||||| || | |||| || || |||||||| ||||| || ||||||||
Sbjct 607520 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAG 607579
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| ||| | || | || ||||| || | ||||| |||||||| |||||| ||
Sbjct 607580 AGCATAAAGGGGTTACCAGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGT 607639
Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAA 66258
|| || || | | |||| | ||| || |||| ||||| || ||||||
Sbjct 607640 GCGCGAACAGT-CTCGCGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAA 607698
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|||||| | || |||| || | || |||| || || |||||||| | ||| |
Sbjct 607699 TTCTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTT 607758
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|| | | || ||||| ||| || || ||||| ||||| || ||||||||||||||
Sbjct 607759 GCCGTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATC 607818
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
||| || || |||||| ||||||| || ||||||| ||| ||||| |||||| |||
Sbjct 607819 GCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTC 607878
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
|| |||||||| || |||||||||||||| | || ||| ||| |||||| |||||
Sbjct 607879 AGCGTGCCATGGCTCTAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTC 607938
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
||| |||||||| |||||| | ||||| | ||| || | ||| ||||||||| | ||
Sbjct 607939 GACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCC 607998
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| ||||| ||||| || || || || || ||| || || || ||||||||
Sbjct 607999 GTTAGTGCCACCGATGTATGAGCCAGTAGCACGAATGCGGTGCACGTTGAGGCCAATACC 608058
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAAT 66675
|| || ||||| ||||| ||||| || | | ||| | | |||||||| ||
Sbjct 608059 GCCAGCGGTCTTGGAGATCAACGCACA---GGTCTTGAGTGTGTCGTAAATGCCGTCGAT 608115
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
||| |||| ||| | |||| ||||||| | ||| ||| |||||| | ||
Sbjct 608116 ACTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGC 608175
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
||| | || || | ||||| || ||||| | |||||||||| | ||| |||||
Sbjct 608176 GTTGAACAACGTCGGCGAGGCGTGTGTGAAGTACTTTTGAGACATGTAGTCGTAGGTCTC 608235
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855
|||| | || |||| || || ||||| || | ||| ||||| || | || |||
Sbjct 608236 GATGGCTTTCTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTG 608295
Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915
|| || ||| | | | | || || | | | || ||||| || || |||||||
Sbjct 608296 TGGGCGCTCGGCGACCTTGCCGTTTATGCGGAGGAGATATGAGCGCTCAAGTGTCTTGAA 608355
Query 66916 ACCAAAGTACGAGTAATTGAAATC 66939
||||||| || ||| ||||| ||
Sbjct 608356 ACCAAAGAACTGGTAGTTGAAGTC 608379
Score = 158 bits (174), Expect = 1e-33
Identities = 561/857 (65%), Gaps = 30/857 (4%)
Strand=Plus/Minus
Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149
|||| |||||||| ||||| || ||||| |||||||| | |||||| |||| | |||
Sbjct 2204185 TGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCAGAGGAGATCGACCTCTCC 2204126
Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205
|| ||| | | |||||| | |||| | | ||| | || | ||||| ||
Sbjct 2204125 AAGGACCTTCACGACTGGAACAAGCGTCTCAACGAT-GACGAGCGCTTCTTCATCTCCCA 2204067
Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265
|| | || ||||| || || || || || || ||||| ||||| | | || || ||
Sbjct 2204066 CGTCCTCGCCTTCTTCGCAGCCTCCGATGGCATTGTCAACGAGAACCTTGTTGAGCGATT 2204007
Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325
| | || || ||| | | ||||| || || |||||||| ||||| || |||||
Sbjct 2204006 CTCTAGCGAAGTACAAATCCCCGAGGCACGATGCTTCTACGGTTTCCAAATCATGATGGA 2203947
Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA 61385
||| || ||||| |||| ||| | | |||||||| || ||||| || |||| | |
Sbjct 2203946 GAACGTTCACTCAGAGACCTACTCTCTGCTCATCGACACATACATTAGCGAGCCCAAGCA 2203887
Query 61386 ACGT--GAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGCG 61440
|| | || | ||||| |||||||| | || || | | | || ||| ||
Sbjct 2203886 GCGCAGGTACC--TCTTCAACGCCATCGACAACATCCC--CTGC-ATCCGCAAGAAGGCC 2203832
Query 61441 GATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499
|| |||||| | |||||| || | | ||| | ||||| | | || | | ||
Sbjct 2203831 GACTGGGCCCTGCGATGGATCTCCGACAAGAACTCC-ACATTCGCCAACCGCCTCGTTGC 2203773
Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559
||| || | || |||||| | || ||||| || || || ||| | ||||| ||| | ||
Sbjct 2203772 ATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAA 2203713
Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619
||| || || || ||||||||||| || ||| ||| ||| | || || || ||||||||
Sbjct 2203712 GAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGG 2203653
Query 61620 CATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCG 61677
|||||| || || | ||| || || ||| | || || | ||| | || |
Sbjct 2203652 CATGCACACCGACTTCGCCTGCCTT-CTCTTC--TCTCT-CCTCGAGAACAAGCCCAGCC 2203597
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
| ||| ||| | | || | ||| || || || || ||||| || |||
Sbjct 2203596 CA-GAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGC 2203538
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
||||| | || | | || |||||||||| | || |||| || || || ||
Sbjct 2203537 GACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAG 2203478
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTA---TGAAGCGGATCTATAATACGAAA 61854
|| || || ||||||||| || | | | || | | || | |||| | | |
Sbjct 2203477 TTCGTCGCTGACCGTCTGCTGTTGGCCCTCGGCAACGTCAA---GGTCTACCACGCCACC 2203421
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
||||| || || |||||||| | ||||| |||| ||| ||||| || || ||||||||
Sbjct 2203420 AACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAG 2203361
Query 61915 CGTGTAGGCGACTATCA 61931
|| || |||||||| ||
Sbjct 2203360 CGCGTCGGCGACTACCA 2203344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567869175280
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