Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq22 96.9 1e-14 >seq22 Length=2852027 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 364370 ACCCTCTCTCCTCGCAA-GGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAAT 364428 ||||||| | || || ||| || ||||||||| | | ||| || | | |||| Sbjct 2620593 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACACTCGATCAAATGGGCAAT 2620534 Query 364429 AGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGC 364488 ||||||||||| ||||||| | | ||||||||||| | || || | || || Sbjct 2620533 TGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCCTCCCT 2620474 Query 364489 GGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGC 364547 || || ||||||||||| || || | | ||| |||||||||||||||||| | | | Sbjct 2620473 GGAGAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACCGTGAC 2620415 Query 364548 GAGAAGCAAACTTGTCGCCAAT 364569 ||||||||||||| || ||||| Sbjct 2620414 GAGAAGCAAACTTATCACCAAT 2620393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885747947111