Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq22 96.9 1e-14
>seq22
Length=2852027
Score = 96.9 bits (106), Expect = 1e-14
Identities = 145/202 (72%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 364370 ACCCTCTCTCCTCGCAA-GGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAAT 364428
||||||| | || || ||| || ||||||||| | | ||| || | | ||||
Sbjct 2620593 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACACTCGATCAAATGGGCAAT 2620534
Query 364429 AGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGC 364488
||||||||||| ||||||| | | ||||||||||| | || || | || ||
Sbjct 2620533 TGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCCTCCCT 2620474
Query 364489 GGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGC 364547
|| || ||||||||||| || || | | ||| |||||||||||||||||| | | |
Sbjct 2620473 GGAGAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACCGTGAC 2620415
Query 364548 GAGAAGCAAACTTGTCGCCAAT 364569
||||||||||||| || |||||
Sbjct 2620414 GAGAAGCAAACTTATCACCAAT 2620393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885747947111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |