Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq83 91.5 9e-17
seq80 91.5 9e-17
>seq83
Length=7934
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2691 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2635
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 2634 GTCAGGGACGTAAT-CAACGCATGCT 2610
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 5466 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5522
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 5523 GTCAGGGACGTAAT-CAACGCATGCT 5547
>seq80
Length=8840
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 4551 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4495
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
| |||||||||||| ||||||| |||
Sbjct 4494 GTCAGGGACGTAAT-CAACGCATGCT 4470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799560080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |