Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24] 156 sequences; 34,355,870 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq83 801 0.0 seq80 801 0.0 seq139 430 4e-118 seq138 399 7e-109 seq84 399 7e-109 seq143 206 8e-51 seq43 98.7 3e-18 >seq83 Length=7934 Score = 801 bits (888), Expect = 0.0 Identities = 481/504 (95%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1527 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1468 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1467 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1408 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1407 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1348 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1347 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCAGCG 1288 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| ||||||| ||| ||||||| |||||||||||| ||||||||||||| ||||| Sbjct 1287 CAAGGCTATGCGATCCGTAAAGTTATCATGAATCACCAAAAAGCCCCGAAGGGCATTGGT 1228 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||| Sbjct 1227 TTTTTATCTAATAAACACATCCCTTCCGAAGTCGGGATTTTCAGCATGTATTAGCTCTAG 1168 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1167 AATTACCACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACGATAACTGATTTAATGA 1108 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 1107 GCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1049 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 1048 AGACAAGCATATGACTACTGGCAG 1025 Score = 801 bits (888), Expect = 0.0 Identities = 481/504 (95%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6630 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 6689 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6690 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6749 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6750 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 6809 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 6810 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCAGCG 6869 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| ||||||| ||| ||||||| |||||||||||| ||||||||||||| ||||| Sbjct 6870 CAAGGCTATGCGATCCGTAAAGTTATCATGAATCACCAAAAAGCCCCGAAGGGCATTGGT 6929 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||| Sbjct 6930 TTTTTATCTAATAAACACATCCCTTCCGAAGTCGGGATTTTCAGCATGTATTAGCTCTAG 6989 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 6990 AATTACCACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACGATAACTGATTTAATGA 7049 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 7050 GCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 7108 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 7109 AGACAAGCATATGACTACTGGCAG 7132 >seq80 Length=8840 Score = 801 bits (888), Expect = 0.0 Identities = 481/504 (95%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3387 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 3328 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3327 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3268 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3267 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 3208 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 3207 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCAGCG 3148 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| ||||||| ||| ||||||| |||||||||||| ||||||||||||| ||||| Sbjct 3147 CAAGGCTATGCGATCCGTAAAGTTATCATGAATCACCAAAAAGCCCCGAAGGGCATTGGT 3088 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||| Sbjct 3087 TTTTTATCTAATAAACACATCCCTTCCGAAGTCGGGATTTTCAGCATGTATTAGCTCTAG 3028 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 3027 AATTACCACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACGATAACTGATTTAATGA 2968 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 2967 GCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2909 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2908 AGACAAGCATATGACTACTGGCAG 2885 >seq139 Length=1987 Score = 430 bits (476), Expect = 4e-118 Identities = 309/355 (87%), Gaps = 1/355 (0%) Strand=Plus/Plus Query 96 GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC 155 |||||||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||| Sbjct 1213 GCCTTCCTTGGATGGGGTAGCCGTTTCTCAGGCTACCTCTCTGGAATTGAACCCTAATTC 1272 Query 156 CCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 ||||||||||||||| ||||| ||| |||| || | |||||||||||||||||||||||| Sbjct 1273 CCCGTTACCCGTTGAAACCATAGTAAGCCAATACCTTACCATCGAAAGTTGATAGGGCAG 1332 Query 216 AAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAG-TTATTATGAATC 274 |||||||||| |||| |||| || |||||| ||||||| || || |||||||||| | Sbjct 1333 AAATTTGAATAAACCGTCGCTAGCGCAAGGCTATGCGATCTGTAAAAATTATTATGAACC 1392 Query 275 ACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCG 334 ||| | ||||||||||||| |||| ||| ||||||| || || |||||||||||||| Sbjct 1393 ACCCAAAAGCCCCGAAGGGCATTGGGCTTTGATCTAATCAACGCATCCCTTCCGAAGTCG 1452 Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 ||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||| | | Sbjct 1453 GGGTTTTCAGCATGTATCAGCTCTAGAATTACCACGGATATCCAAGCGGTAAGGTATTTT 1512 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 ||||||||||||||||||||| |||||| |||||||||||||| ||||| |||| Sbjct 1513 CAAATAAACGATAACTGATTTGATGAGCTATTCGCAGTTTCACGGTATAATTTGC 1567 >seq138 Length=2045 Score = 399 bits (442), Expect = 7e-109 Identities = 297/346 (86%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 98 CTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 ||||||||||| ||||||| ||||||||||| |||||| ||||| ||||| |||||||| Sbjct 534 CTTCCTTGGATAGGGTAGCCTTTTCTCAGGCTGCCTCTCTGGAATTGAACCTTAATTCCC 475 Query 158 CGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAA 217 |||||||||||| ||||||||| |||| || | |||||||||||||||||||||||||| Sbjct 474 TGTTACCCGTTGAAACCATGGTAAGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAA 415 Query 218 ATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAA-GTTATTATGAATCAC 276 ||||||||| ||| |||| || |||||| ||||||| || || | | ||||| ||| Sbjct 414 ATTTGAATGGACCGTCGCTAGCGCAAGGCTATGCGATCTGTAAAAGATTGAATGAACCAC 355 Query 277 CAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGG 336 | | ||||||||||| |||| |||||||||||||| || ||||||||||||||| Sbjct 354 CCACAGGCCCCGAAGGGAATTGGGCTTTTATCTAATAAACGCATCCCTTCCGAAGTCGGC 295 Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCA 396 ||||| ||||||||| ||||||||||||||||||| |||||| | |||||||| | ||| Sbjct 294 GTTTTCAGCATGTATCAGCTCTAGAATTACCACGGATATCCAAGCGGTAAGGTATTTTCA 235 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 234 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACGGTAT 189 >seq84 Length=7859 Score = 399 bits (442), Expect = 7e-109 Identities = 297/346 (86%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 98 CTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 ||||||||||| ||||||| ||||||||||| |||||| ||||| ||||| |||||||| Sbjct 7392 CTTCCTTGGATAGGGTAGCCTTTTCTCAGGCTGCCTCTCTGGAATTGAACCTTAATTCCC 7333 Query 158 CGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAA 217 |||||||||||| ||||||||| |||| || | |||||||||||||||||||||||||| Sbjct 7332 TGTTACCCGTTGAAACCATGGTAAGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAA 7273 Query 218 ATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAA-GTTATTATGAATCAC 276 ||||||||| ||| |||| || |||||| ||||||| || || | | ||||| ||| Sbjct 7272 ATTTGAATGGACCGTCGCTAGCGCAAGGCTATGCGATCTGTAAAAGATTGAATGAACCAC 7213 Query 277 CAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGG 336 | | ||||||||||| |||| |||||||||||||| || ||||||||||||||| Sbjct 7212 CCACAGGCCCCGAAGGGAATTGGGCTTTTATCTAATAAACGCATCCCTTCCGAAGTCGGC 7153 Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCA 396 ||||| ||||||||| ||||||||||||||||||| |||||| | |||||||| | ||| Sbjct 7152 GTTTTCAGCATGTATCAGCTCTAGAATTACCACGGATATCCAAGCGGTAAGGTATTTTCA 7093 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 7092 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACGGTAT 7047 >seq143 Length=1518 Score = 206 bits (228), Expect = 8e-51 Identities = 297/423 (70%), Gaps = 57/423 (13%) Strand=Plus/Plus Query 137 CGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCA 196 |||||||||||||| ||||||||| |||||| | |||||||||||| |||||| Sbjct 105 CGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCA 164 Query 197 TCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGC-CATGCGATT 255 |||||||||||||||||||| || ||||| | |||||| | | || | |||||| Sbjct 165 TCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATC 224 Query 256 CGTT--AAGTTATTATGAATCACCAA-------------------------GGAGCCCCG 288 | | ||||| || ||||||| |||||| | Sbjct 225 GGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGACCCCCGGCCGGAGCCGGG 284 Query 289 AAGG--------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-------GAAGTC 333 | || | ||||||||| |||| |||||| ||| | | || |||| Sbjct 285 AGGGAGCTCACCGGGTTGGTTTTG-ATCTGATAAATGCACGCATCCCCCCCCGGGAAGG- 342 Query 334 GGGGTTT-------TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 ||||| | |||||||||||||||||||||||||| |||||||| |||| | Sbjct 343 GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG 402 Query 387 GGTA-----CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | | | | |||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 403 AGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 462 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 463 CCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 522 Query 502 CAG 504 ||| Sbjct 523 CAG 525 >seq43 Length=149448 Score = 98.7 bits (108), Expect = 3e-18 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 ||||||||||||| |||||||||||||| ||| | | |||| | | ||||||||| | | Sbjct 7546 GGGTTTTTAGCATATATTAGCTCTAGAACTACTATAGATATCTAAGCAGTAAGGTATTTT 7605 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 ||||||| |||||| ||||||| ||| || | ||||| || ||||| Sbjct 7606 TAAATAAATAATAACTAATTTAATAAGCTTTTTGTAGTTTTACAGTATA 7654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397643776