Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq22 136 6e-30 >seq22 Length=683331 Score = 136 bits (150), Expect = 6e-30 Identities = 115/140 (82%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 89 CTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGA 147 || ||| || ||||| ||||| | |||||||||| || ||| ||||| | | Sbjct 263949 CTCTCCTCAGCACGACAGAATTTAACAAGATTACCCAATTCTTTCGAACAAGGAAAAGAA 264008 Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 264009 CTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 264068 Query 208 CTGTTATTGCCTCAAACTTC 227 |||||||||||||||||||| Sbjct 264069 CTGTTATTGCCTCAAACTTC 264088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999424485