Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq22 351 4e-94 >seq22 Length=683331 Score = 351 bits (388), Expect = 4e-94 Identities = 229/252 (91%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 264722 GCTAGGATGCTGCCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCT 264663 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 |||| |||||||||||| | |||||||| |||| |||||||||||||||||| |||||| Sbjct 264662 AACAGCTATGCGAGTGTCTAGGTGTCAAGCCCGAGCGCGTAATGAAAGTGAATGGAGGTA 264603 Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 264602 GGAACCCGCAAGGGTGCACCATCGACCGATCCTGATGTCTTCGGAAGGATTTGAGTAAGA 264543 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 |||| |||||||||||| | || |||||||||||||| ||||||| || ||||||||||| Sbjct 264542 GCATGGCTGTTGGGACCTGGAAAATGGTGAACTATGCTTGAATAGAGTTAAGCCAGAGGA 264483 Query 617 AACTCTGGTGGA 628 || ||| || || Sbjct 264482 AATTCTCGTCGA 264471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998305450