Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq22 260 2e-67 >seq22 Length=683331 Score = 260 bits (288), Expect = 2e-67 Identities = 194/226 (86%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 264008 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 264067 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||| || || ||| ||| || |||||||||||| || Sbjct 264068 CCTGTTATTGCCTCAAACTTCTATCAACT-TAAGTTGATACTCTCTCTAAGAAGCCGGCG 264126 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||||||| ||| |||||||||||| |||||||||| ||||||||| | |||| Sbjct 264127 ACCAACCAAAGTTAGCCTAGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAGTTAA 264186 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||| |||| ||||||||||||||||||||||||||| Sbjct 264187 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACC 264232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799390199