Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 2e-31
seq22 102 1e-19
>seq2
Length=1797335
Score = 141 bits (156), Expect = 2e-31
Identities = 93/103 (90%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
|||||| ||||| | |||||||||||||||||| ||| | |||||||||||||||| |||
Sbjct 377620 CGACATGGAAGGGTTAAAAAGCAACGTCGCTATTAACACCTGGCTGCCACAAGCCAATTA 377679
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|||||||||||||||||||||||||||| ||||||||||||
Sbjct 377680 TCCCTGTGGTAACTTTTCTGGCACCTCTGATCTCAAATTTCGA 377722
>seq22
Length=683331
Score = 102 bits (112), Expect = 1e-19
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA--CTAAAGGATCGA 266
|||||||||||||||||| | |||||||| |||| ||||||||| | |||||||||| |
Sbjct 265081 CCCTGTGGTAACTTTTCTCGTACCTCTAGTCTCACATTTCGAGGAACTCTAAAGGATCTA 265140
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||||| ||| ||| | ||||||||
Sbjct 265141 TAGGCCACATTTTTATGTTCTGTATTCA 265168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399325024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |