Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq22 279 1e-72
>seq22
Length=683331
Score = 279 bits (308), Expect = 1e-72
Identities = 196/224 (88%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||
Sbjct 264172 GAGCGAGACCTTACTCTGCTAAATAGCTAGGCTAACTTTGGTTGGTCGCCGGCTTCTTAG 264113
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|| || |||| || ||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 264112 AGAGAGTATCAACTTAAGTTGATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 264053
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 264052 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTTTCCTTGTTCG 263993
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243
||| ||||||||||||||||| |||||||||||| ||| ||
Sbjct 263992 AAAGAATTGGGTAATCTTGTTAAATTCTGTCGTGCTGAGGAGAG 263949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199251712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |