Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq22 279 1e-72 >seq22 Length=683331 Score = 279 bits (308), Expect = 1e-72 Identities = 196/224 (88%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 ||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||| Sbjct 264172 GAGCGAGACCTTACTCTGCTAAATAGCTAGGCTAACTTTGGTTGGTCGCCGGCTTCTTAG 264113 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 || || |||| || ||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 264112 AGAGAGTATCAACTTAAGTTGATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 264053 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 264052 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTTTCCTTGTTCG 263993 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 ||| ||||||||||||||||| |||||||||||| ||| || Sbjct 263992 AAAGAATTGGGTAATCTTGTTAAATTCTGTCGTGCTGAGGAGAG 263949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199251712