Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq22 288 3e-75
seq12 95.1 4e-17
>seq22
Length=683331
Score = 288 bits (318), Expect = 3e-75
Identities = 213/248 (86%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct 265201 CTTTTGCTCTACTAAAGATTTCTGTTCTTTATAAGTCCCCCTTAGGACACCTGCGTTATG 265260
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||||
Sbjct 265261 GTTTAACAGATGTGCCGCCCGAGCCAAATTCCCCACCTAACAATGTCTCCAACCCGGATC 265320
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||| | ||||||||||| | | || | | |||| || |||| |||||||||| ||
Sbjct 265321 AGCCCACAAAGGACCTTAATACTACAAGTTAGGCGGTAAAACCCAGCTCCGCTTCATCGA 265380
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 265381 ATAAGTAAAAAAACAATAAGGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACCTA 265437
Query 247 TTCTACAC 254
| ||||||
Sbjct 265438 TCCTACAC 265445
>seq12
Length=1097884
Score = 95.1 bits (104), Expect = 4e-17
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538
|||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 738230 GAATCTCTTTGCTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACT 738289
Query 539 TTCTG 543
| |||
Sbjct 738290 TCCTG 738294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635198708192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |