Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq22 288 3e-75 seq12 95.1 4e-17 >seq22 Length=683331 Score = 288 bits (318), Expect = 3e-75 Identities = 213/248 (86%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| Sbjct 265201 CTTTTGCTCTACTAAAGATTTCTGTTCTTTATAAGTCCCCCTTAGGACACCTGCGTTATG 265260 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||||||| Sbjct 265261 GTTTAACAGATGTGCCGCCCGAGCCAAATTCCCCACCTAACAATGTCTCCAACCCGGATC 265320 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | ||||||||||| | | || | | |||| || |||| |||||||||| || Sbjct 265321 AGCCCACAAAGGACCTTAATACTACAAGTTAGGCGGTAAAACCCAGCTCCGCTTCATCGA 265380 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||||||||||||||||||||| |||||||| |||||||| || Sbjct 265381 ATAAGTAAAAAAACAATAAGGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACCTA 265437 Query 247 TTCTACAC 254 | |||||| Sbjct 265438 TCCTACAC 265445 >seq12 Length=1097884 Score = 95.1 bits (104), Expect = 4e-17 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538 |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 738230 GAATCTCTTTGCTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACT 738289 Query 539 TTCTG 543 | ||| Sbjct 738290 TCCTG 738294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198708192